C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000558391 RP11-752G15.9-001 ENSG00000259315 9606 - 15:82726307-82727425 transcribed_processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverLungPlacentaENST00000558391
Transcript ID Bladder Brain Liver Lung Placenta
ENST00000558391 0.120±0.00 0.135±0.00 0.062±0.00 0.124±0.00 0.049±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106215 Actg1-201 protein_coding Mus_musculus 0 693
ENSMUST00000071555 Actg1-001 protein_coding Mus_musculus 0 693
ENSMUST00000100497 Actb-001 protein_coding Mus_musculus 0 678
ENSMUST00000082300 Gm8399-201 pseudogene Mus_musculus 0 636
ENSMUST00000078717 Lrrc58-001 protein_coding Mus_musculus 0 527
ENSMUST00000119947 Gm15725-001 transcribed_processed_pseudogene Mus_musculus 0 521
ENSMUST00000167721 Actb-002 protein_coding Mus_musculus 0 481
ENSMUST00000146697 Gm8464-001 transcribed_processed_pseudogene Mus_musculus 0 453
ENSMUST00000140208 Gm8464-002 processed_transcript Mus_musculus 0 453
ENSMUST00000151942 Gm4750-001 transcribed_processed_pseudogene Mus_musculus 0 453
ENSMUST00000152262 Gm4750-002 processed_transcript Mus_musculus 0 453
ENSMUST00000131103 Actg1-002 nonsense_mediated_decay Mus_musculus 0 425
ENSMUST00000099636 Actg-ps1-201 processed_pseudogene Mus_musculus 0 279
ENSMUST00000062147 Actg1-006 protein_coding Mus_musculus 0 268
ENSMUST00000089616 Actg1-009 protein_coding Mus_musculus 0 196

Loading