C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation elongation factor 1 alpha 1 pseudogene 22
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000559385 EEF1A1P22-001 ENSG00000259612 9606 - 15:52937139-52938518 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000559385
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000559385 0.849±0.00 0.653±0.00 0.042±0.00 0.222±0.00 0.316±0.28 0.449±0.39 0.099±0.00 0.604±0.02 0.064±0.02 0.774±0.00 0.155±0.00 0.331±0.18 0.534±0.23 0.360±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007K3 CIL_0007K3_0001 UCNEbase 15:52752889-53754980

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042235 Eef1a1-001 protein_coding Mus_musculus 0 1592
ENSMUST00000187672 RP23-307G23.3-001 processed_pseudogene Mus_musculus 0 1493
ENSMUST00000118928 Gm13456-001 processed_pseudogene Mus_musculus 0 1493
ENSMUST00000118650 Gm6767-001 processed_pseudogene Mus_musculus 0 1384
ENSMUST00000161562 Gm5822-001 processed_pseudogene Mus_musculus 0 1290
ENSMUST00000121596 Gm12912-001 processed_pseudogene Mus_musculus 0 1262
ENSMUST00000167498 Gm6548-001 processed_pseudogene Mus_musculus 0 1212
ENSMUST00000144523 Eef1a1-005 retained_intron Mus_musculus 0 887
ENSMUST00000154207 Eef1a1-008 protein_coding Mus_musculus 0 881
ENSDART00000023156 eef1a1l1-201 protein_coding Danio_rerio 0 773
ENSMUST00000126614 Eef1a1-006 retained_intron Mus_musculus 0 761
ENSDART00000129362 eef1a1l1-203 protein_coding Danio_rerio 0 754
ENSDART00000039129 eef1a1l1-202 protein_coding Danio_rerio 0 749
ENSMUST00000156988 Eef1a1-003 protein_coding Mus_musculus 0 660
ENSMUST00000187291 RP23-465C10.2-001 processed_pseudogene Mus_musculus 0 649
ENSMUST00000150960 Eef1a1-002 retained_intron Mus_musculus 0 573
ENSMUST00000143570 Eef1a1-007 processed_transcript Mus_musculus 0 521
ENSMUST00000129380 Eef1a1-004 retained_intron Mus_musculus 0 407

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