C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000560958 RP11-752G15.9-002 ENSG00000259315 9606 - 15:82725873-82738616 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000560958
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000560958 0.089±0.00 0.360±0.00 0.189±0.00 0.252±0.00 0.079±0.05 0.171±0.00 0.138±0.00 0.049±0.00 0.009±0.00 0.142±0.02 0.054±0.00 0.144±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000071555 Actg1-001 protein_coding Mus_musculus 0 798
ENSMUST00000106215 Actg1-201 protein_coding Mus_musculus 0 789
ENSMUST00000100497 Actb-001 protein_coding Mus_musculus 0 680
ENSMUST00000082300 Gm8399-201 pseudogene Mus_musculus 0 636
ENSMUST00000078717 Lrrc58-001 protein_coding Mus_musculus 0 529
ENSMUST00000119947 Gm15725-001 transcribed_processed_pseudogene Mus_musculus 0 521
ENSMUST00000167721 Actb-002 protein_coding Mus_musculus 0 483
ENSMUST00000146697 Gm8464-001 transcribed_processed_pseudogene Mus_musculus 0 453
ENSMUST00000140208 Gm8464-002 processed_transcript Mus_musculus 0 453
ENSMUST00000151942 Gm4750-001 transcribed_processed_pseudogene Mus_musculus 0 453
ENSMUST00000152262 Gm4750-002 processed_transcript Mus_musculus 0 453
ENSMUST00000131103 Actg1-002 nonsense_mediated_decay Mus_musculus 0 425
ENSMUST00000062147 Actg1-006 protein_coding Mus_musculus 0 363
ENSMUST00000099636 Actg-ps1-201 processed_pseudogene Mus_musculus 0 279
ENSMUST00000089616 Actg1-009 protein_coding Mus_musculus 0 196

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