C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tubulin, alpha 8 pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000569261 TUBA8P2-001 ENSG00000261665 9606 + 15:83739784-83740199 transcribed_processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLiverPlacentaTestisENST00000569261
Transcript ID Breast Liver Placenta Testis
ENST00000569261 0.044±0.00 0.770±0.00 0.096±0.00 0.104±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007U9 CIL_0007U9_0001 VISTA 15:83407808-84009696
CIL_000406 CIL_000406_0001 CGP 15:83447228-84039842

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000122404 Gm14150-001 processed_pseudogene Mus_musculus 0 396
ENSMUST00000077577 Tuba1b-001 protein_coding Mus_musculus 0 385
ENSMUST00000097014 Tuba1a-001 protein_coding Mus_musculus 0 379
ENSMUST00000058914 Tuba1c-201 protein_coding Mus_musculus 0 379
ENSMUST00000077991 Gm5620-001 processed_pseudogene Mus_musculus 0 348
ENSMUST00000087445 Tuba3b-001 protein_coding Mus_musculus 0 191
ENSMUST00000136329 Tuba1a-003 processed_transcript Mus_musculus 3e-29 132
ENSMUST00000134214 Tuba1a-002 processed_transcript Mus_musculus 1e-28 130
ENSMUST00000078739 Gm17383-201 pseudogene Mus_musculus 2e-26 122

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