C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | tubulin, beta 6 class V | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000586810  |
TUBB6-003 |
ENSG00000176014 |
9606 | + |
18:12308241-12325763  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007ZP | CIL_0007ZP_0001 | VISTA | 18:11977697-12581651 |
| CIL_00025T | CIL_00025T_0002 | CGP | 18:12254319-12344320 |
| CIL_0005DV | CIL_0005DV_0001 | CGP | 18:12307669-12377314 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005200 | IEA | structural constituent of cytoskeleton |
| GO:0005525 | IEA | GTP binding |
| GO:0005874 | IEA | microtubule |
| GO:0007017 | IEA | microtubule-based process |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000001513
|
Tubb6-201 | protein_coding | Mus_musculus | 0 | 869 |
|
ENSMUST00000075774
|
Tubb2b-201 | protein_coding | Mus_musculus | 0 | 802 |
|
ENSMUST00000056427
|
Tubb2a-201 | protein_coding | Mus_musculus | 0 | 771 |
|
ENSMUST00000071135
|
Tubb4a-201 | protein_coding | Mus_musculus | 0 | 713 |
|
ENSDART00000041279
|
tubb4b-001 | protein_coding | Danio_rerio | 0 | 593 |
|
ENSDART00000024135
|
protein_coding | Danio_rerio | 0 | 586 | |
|
ENSDART00000129104
|
protein_coding | Danio_rerio | 0 | 586 | |
|
ENSDART00000127071
|
FP102463.1-201 | protein_coding | Danio_rerio | 0 | 580 |
|
ENSDART00000134744
|
tubb4b-003 | processed_transcript | Danio_rerio | 0 | 407 |
|
ENSDART00000147110
|
tubb4b-002 | processed_transcript | Danio_rerio | 0 | 329 |
