C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Uncharacterized protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000127071 FP102463.1-201 ENSDARG00000086257 7955 + 2:1691997-1695667 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainMuscleENSDART00000127071
Transcript ID Brain Muscle
ENSDART00000127071 4.154±1.78 0.258±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0006184 IEA GTP catabolic process
GO:0043234 IEA protein complex
GO:0051258 IEA protein polymerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000001513 Tubb6-201 protein_coding Mus_musculus 0 881
ENSMUST00000001566 Tubb5-001 protein_coding Mus_musculus 0 835
ENSMUST00000056427 Tubb2a-201 protein_coding Mus_musculus 0 1022
ENSMUST00000071134 Tubb3-001 protein_coding Mus_musculus 0 918
ENSMUST00000075774 Tubb2b-201 protein_coding Mus_musculus 0 1024
ENSMUST00000134978 Tubb5-003 protein_coding Mus_musculus 6e-39 165
ENSMUST00000173253 Tubb5-004 retained_intron Mus_musculus 0 368
ENST00000259818 TUBB2B-001 protein_coding Homo_sapiens 0 1035
ENST00000315491 TUBB3-001 protein_coding Homo_sapiens 0 933
ENST00000317702 TUBB6-001 protein_coding Homo_sapiens 0 876
ENST00000333628 TUBB2A-001 protein_coding Homo_sapiens 0 1035
ENST00000417736 TUBB6-002 retained_intron Homo_sapiens 0 876
ENST00000473006 TUBB2B-002 processed_transcript Homo_sapiens 0 1035
ENST00000489942 TUBB2A-002 processed_transcript Homo_sapiens 0 326
ENST00000554444 TUBB3-002 protein_coding Homo_sapiens 0 933
ENST00000555609 TUBB3-013 nonsense_mediated_decay Homo_sapiens 0 933
ENST00000555810 TUBB3-004 protein_coding Homo_sapiens 0 483
ENST00000556536 TUBB3-012 nonsense_mediated_decay Homo_sapiens 0 302
ENST00000556922 TUBB3-001 protein_coding Homo_sapiens 0 933
ENST00000557490 TUBB3-014 nonsense_mediated_decay Homo_sapiens 0 291
ENST00000586810 TUBB6-003 nonsense_mediated_decay Homo_sapiens 0 580
ENST00000590103 TUBB6-008 protein_coding Homo_sapiens 0 693
ENST00000591208 TUBB6-005 protein_coding Homo_sapiens 0 754
ENST00000591463 TUBB6-014 protein_coding Homo_sapiens 0 289

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