C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000024135 ENSDARG00000039522 7955 - 2:1812389-1822105 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartMuscleENSDART00000024135
Transcript ID Brain Heart Muscle
ENSDART00000024135 9.727±0.47 0.080±0.00 0.639±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003924 IEA GTPase activity
GO:0005200 IEA structural constituent of cytoskeleton
GO:0005525 IEA GTP binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005874 IEA microtubule
GO:0006184 IEA GTP catabolic process
GO:0007017 IEA microtubule-based process
GO:0043234 IEA protein complex
GO:0051258 IEA protein polymerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000001513 Tubb6-201 protein_coding Mus_musculus 0 987
ENSMUST00000056427 Tubb2a-201 protein_coding Mus_musculus 0 1195
ENSMUST00000071134 Tubb3-001 protein_coding Mus_musculus 0 1042
ENSMUST00000075774 Tubb2b-201 protein_coding Mus_musculus 0 1194
ENST00000259818 TUBB2B-001 protein_coding Homo_sapiens 0 1230
ENST00000315491 TUBB3-001 protein_coding Homo_sapiens 0 1064
ENST00000317702 TUBB6-001 protein_coding Homo_sapiens 0 998
ENST00000333628 TUBB2A-001 protein_coding Homo_sapiens 0 1225
ENST00000417736 TUBB6-002 retained_intron Homo_sapiens 0 933
ENST00000473006 TUBB2B-002 processed_transcript Homo_sapiens 0 1158
ENST00000489942 TUBB2A-002 processed_transcript Homo_sapiens 0 320
ENST00000553656 TUBB3-007 nonsense_mediated_decay Homo_sapiens 3e-16 90
ENST00000553967 TUBB3-011 protein_coding Homo_sapiens 0 189
ENST00000554116 TUBB3-008 processed_transcript Homo_sapiens 3e-16 90
ENST00000554336 TUBB3-010 protein_coding Homo_sapiens 1.4013e-45 187
ENST00000554444 TUBB3-002 protein_coding Homo_sapiens 0 981
ENST00000554927 TUBB3-009 retained_intron Homo_sapiens 3e-31 139
ENST00000555576 TUBB3-005 protein_coding Homo_sapiens 0 191
ENST00000555609 TUBB3-013 nonsense_mediated_decay Homo_sapiens 0 944
ENST00000555810 TUBB3-004 protein_coding Homo_sapiens 0 523
ENST00000556536 TUBB3-012 nonsense_mediated_decay Homo_sapiens 0 307
ENST00000556922 TUBB3-001 protein_coding Homo_sapiens 0 979
ENST00000557262 TUBB3-006 nonsense_mediated_decay Homo_sapiens 4e-16 90
ENST00000557490 TUBB3-014 nonsense_mediated_decay Homo_sapiens 0 296
ENST00000586810 TUBB6-003 nonsense_mediated_decay Homo_sapiens 0 586
ENST00000590103 TUBB6-008 protein_coding Homo_sapiens 0 704
ENST00000591208 TUBB6-005 protein_coding Homo_sapiens 0 760
ENST00000591463 TUBB6-014 protein_coding Homo_sapiens 0 294

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