C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 8 pseudogene 47
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000604727 KRT8P47-001 ENSG00000271647 9606 - 1:44103306-44104703 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartLiverLungPlacentaTestisENST00000604727
Transcript ID Breast Heart Liver Lung Placenta Testis
ENST00000604727 0.131±0.00 0.052±0.00 0.426±0.39 0.150±0.00 0.038±0.02 0.312±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B8 CIL_0009B8_0001 VISTA 1:43734711-44337665
CIL_0008SF CIL_0008SF_0001 VISTA 1:43949748-44550457

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023952 Krt8-201 protein_coding Mus_musculus 0 1120
ENSMUST00000023714 4732456N10Rik-001 protein_coding Mus_musculus 0 451
ENSMUST00000023709 Krt5-001 protein_coding Mus_musculus 0 396
ENSMUST00000068904 Krt7-001 protein_coding Mus_musculus 0 327
ENSMUST00000023788 Krt6a-201 protein_coding Mus_musculus 0 283
ENSDART00000065351 krt4-201 protein_coding Danio_rerio 0 276
ENSDART00000012644 krt4-001 protein_coding Danio_rerio 0 276
ENSMUST00000131069 Krt7-002 retained_intron Mus_musculus 0 274
ENSMUST00000023786 Krt6b-201 protein_coding Mus_musculus 0 267
ENSMUST00000100184 Gm5478-201 protein_coding Mus_musculus 2e-30 137
ENSMUST00000023790 Krt1-201 protein_coding Mus_musculus 0.00000000007 73

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