C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone cluster 2, H2aa4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000607355 HIST2H2AA4-001 ENSG00000272196 9606 + 1:149851061-149851624 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonOvaryPlacentaTestisENST00000607355
Transcript ID Breast Colon Ovary Placenta Testis
ENST00000607355 0.688±0.00 0.148±0.00 0.678±0.41 0.878±0.00 2.047±1.85

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000UD CIL_0000UD_0004 CGP 1:149842188-149886652
CIL_0000UC CIL_0000UC_0005 CGP 1:149842204-149886652

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0005622 IEA intracellular
GO:0005634 IDA:IEA nucleus
GO:0008150 ND biological_process
GO:0043565 IEA sequence-specific DNA binding
GO:0046982 IEA protein heterodimerization activity
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000078756 Hist2h2aa2-001 protein_coding Mus_musculus 0 505
ENSMUST00000074976 Hist2h2aa1-001 protein_coding Mus_musculus 0 505
ENSMUST00000091708 Hist1h2al-201 protein_coding Mus_musculus 0 472
ENSMUST00000090782 Hist2h2ac-001 protein_coding Mus_musculus 0 462
ENSMUST00000078369 Hist1h2ab-001 protein_coding Mus_musculus 0 431
ENSMUST00000070124 Hist1h2ai-001 protein_coding Mus_musculus 0 427
ENSMUST00000081342 Hist1h2ap-001 protein_coding Mus_musculus 0 427
ENSMUST00000091745 Hist1h2ao-001 protein_coding Mus_musculus 0 427
ENSMUST00000091751 Hist1h2an-001 protein_coding Mus_musculus 0 420
ENSMUST00000074556 H2afj-001 protein_coding Mus_musculus 0 420
ENSMUST00000091741 Hist1h2ag-001 protein_coding Mus_musculus 0 420
ENSMUST00000102969 Hist1h2ae-001 protein_coding Mus_musculus 0 420
ENSMUST00000171127 Hist1h2ac-001 protein_coding Mus_musculus 0 420
ENSMUST00000090776 Hist1h2ad-001 protein_coding Mus_musculus 0 414
ENSMUST00000091742 Hist1h2ah-001 protein_coding Mus_musculus 0 411
ENSMUST00000074752 Hist1h2ak-001 protein_coding Mus_musculus 0 411
ENSMUST00000052686 H2afx-001 protein_coding Mus_musculus 0 401
ENSMUST00000073261 Hist1h2af-001 protein_coding Mus_musculus 0 401
ENSMUST00000091710 Hist1h2aj-001 unprocessed_pseudogene Mus_musculus 0 364
ENSMUST00000073115 Hist2h2ab-001 protein_coding Mus_musculus 0 361

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