C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone cluster 2, H2ac
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000090782 Hist2h2ac-001 ENSMUSG00000068855 10090 - 3:96220361-96220880 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000090782
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000090782 2.339±1.58 3.017±1.53 0.627±0.09 3.831±2.78 4.677±2.08 6.495±0.84 0.714±0.18 2.322±0.62 7.379±7.83 2.612±0.37 0.398±0.16 6.990±4.07 3.704±3.33 6.286±2.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000UD CIL_0000UD_0009 CGP 3:96220361-96223738

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003677 IEA DNA binding
GO:0046982 IEA protein heterodimerization activity
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000102972 protein_coding Danio_rerio 0 309
ENSDART00000155501 protein_coding Danio_rerio 0 309
ENSDART00000129969 si:ch211-113a14.19-001 protein_coding Danio_rerio 0 296
ENSDART00000103006 protein_coding Danio_rerio 0 296
ENSDART00000110632 protein_coding Danio_rerio 0 296
ENSDART00000103013 si:ch211-113a14.19-001 protein_coding Danio_rerio 0 291
ENSDART00000099859 protein_coding Danio_rerio 0 274
ENSDART00000114908 protein_coding Danio_rerio 0 272
ENSDART00000073402 protein_coding Danio_rerio 0 268
ENSDART00000126259 protein_coding Danio_rerio 0 268
ENSDART00000108936 protein_coding Danio_rerio 0 265
ENSDART00000155060 protein_coding Danio_rerio 0 265
ENSDART00000129239 protein_coding Danio_rerio 0 263
ENSDART00000073454 protein_coding Danio_rerio 0 257
ENSDART00000115109 protein_coding Danio_rerio 0 257
ENSDART00000129403 protein_coding Danio_rerio 0 257
ENSDART00000147978 protein_coding Danio_rerio 0 257
ENST00000314088 HIST1H2AC-001 nonsense_mediated_decay Homo_sapiens 0 418
ENST00000331380 HIST2H2AC-001 protein_coding Homo_sapiens 0 470
ENST00000333151 HIST1H2AJ-001 protein_coding Homo_sapiens 0 455
ENST00000341023 HIST1H2AD-001 protein_coding Homo_sapiens 0 398
ENST00000358739 HIST1H2AI-001 protein_coding Homo_sapiens 0 477
ENST00000359193 HIST1H2AG-001 protein_coding Homo_sapiens 0 472
ENST00000359611 HIST1H2AM-001 protein_coding Homo_sapiens 0 442
ENST00000366695 HIST3H2A-001 protein_coding Homo_sapiens 0 468
ENST00000369159 HIST2H2AA4-001 protein_coding Homo_sapiens 0 462
ENST00000375167 H2AFX-002 nonsense_mediated_decay Homo_sapiens 0 481
ENST00000377459 HIST1H2AH-001 protein_coding Homo_sapiens 0 416
ENST00000377791 HIST1H2AC-201 protein_coding Homo_sapiens 0 418
ENST00000389078 H2AFJ-005 nonsense_mediated_decay Homo_sapiens 0 427
ENST00000479986 HIST1H3J-002 processed_transcript Homo_sapiens 0 388
ENST00000501744 H2AFJ-002 nonsense_mediated_decay Homo_sapiens 0 350
ENST00000530167 H2AFX-001 protein_coding Homo_sapiens 0 481
ENST00000544848 H2AFJ-001 protein_coding Homo_sapiens 0 427
ENST00000602637 HIST1H2AC-002 protein_coding Homo_sapiens 0 418
ENST00000607355 HIST2H2AA4-001 protein_coding Homo_sapiens 0 462
ENST00000612898 HIST1H2BN-001 protein_coding Homo_sapiens 0 448
ENST00000613174 HIST1H2AL-001 protein_coding Homo_sapiens 0 460
ENST00000618958 HIST1H2AK-001 protein_coding Homo_sapiens 0 448

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