C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: staufen double-stranded RNA binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000614381 STAU1-202 ENSG00000124214 9606 - 20:49113341-49154068 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000614381
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000614381 6.374±0.00 1.385±0.00 6.041±0.00 11.622±4.76 8.213±1.49 2.566±0.00 13.943±2.04 10.795±0.87 4.671±0.00 3.261±1.13 13.311±7.17 12.199±2.50 12.236±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001XR CIL_0001XR_0001 CGP 20:49046246-49188367
CIL_0001T2 CIL_0001T2_0001 CGP 20:49113339-49244077

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109235 Stau1-001 protein_coding Mus_musculus 0 1818
ENSMUST00000109236 Stau1-002 protein_coding Mus_musculus 0 1796
ENSMUST00000109238 Stau1-003 protein_coding Mus_musculus 0 1740
ENSMUST00000049412 Stau1-005 protein_coding Mus_musculus 0 1637
ENSMUST00000184390 Stau1-004 nonsense_mediated_decay Mus_musculus 0 1046
ENSMUST00000142481 Stau1-006 retained_intron Mus_musculus 0 944
ENSMUST00000149454 Stau1-008 retained_intron Mus_musculus 0 883
ENSMUST00000154506 Stau1-010 retained_intron Mus_musculus 0 625
ENSMUST00000130790 Stau1-011 retained_intron Mus_musculus 0 414
ENSMUST00000134664 Stau1-009 retained_intron Mus_musculus 0 285

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