C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protocadherin beta 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000622947 PCDHB2-003 ENSG00000112852 9606 + 5:141094606-141097264 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonKidneyMuscleOvaryPlacentaTestisENST00000622947
Transcript ID Bladder Colon Kidney Muscle Ovary Placenta Testis
ENST00000622947 0.099±0.00 0.682±0.00 0.316±0.26 0.211±0.00 0.281±0.16 0.324±0.16 1.813±0.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00062S CIL_00062S_000C CGP 5:141051135-141098703
CIL_00062S CIL_00062S_0004 CGP 5:141094578-141152636

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000056522 Pcdhb2-201 protein_coding Mus_musculus 0 1524
ENSMUST00000056712 Pcdhb4-201 protein_coding Mus_musculus 0 952
ENSMUST00000053856 Pcdhb17-201 protein_coding Mus_musculus 0 946
ENSMUST00000052387 Pcdhb14-201 protein_coding Mus_musculus 0 941
ENSMUST00000051754 Pcdhb3-201 protein_coding Mus_musculus 0 907
ENSMUST00000053073 Pcdhb11-201 protein_coding Mus_musculus 0 872
ENSMUST00000057228 Pcdhb9-201 protein_coding Mus_musculus 0 824
ENSMUST00000050034 Pcdhb15-201 protein_coding Mus_musculus 0 824

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