C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00018I_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000197461-ENSG00000188191 CGP 9606 7:497258-727650
GeneTranscriptPositionBiotype
ENSG00000164818 (HEATR2)
HEAT repeat containing 2 		ENST00000297440 (HEATR2-001) 726701-786475 protein_coding
ENST00000403952 (HEATR2-005) 768475-786044 protein_coding
ENST00000437419 (HEATR2-006) 727219-756792 protein_coding
ENST00000438961 (HEATR2-007) 727252-750953 processed_transcript
ENST00000440747 (HEATR2-002) 727255-786031 protein_coding
ENST00000461576 (HEATR2-009) 779904-785573 retained_intron
ENST00000486546 (HEATR2-008) 778182-779984 processed_transcript
ENST00000491496 (HEATR2-004) 763907-772975 retained_intron
ENSG00000188191 (PRKAR1B)
protein kinase, cAMP-dependent, regulatory, type I, beta 		ENST00000360274 (PRKAR1B-001) 549750-712572 protein_coding
ENST00000400758 (PRKAR1B-009) 550270-602683 protein_coding
ENST00000403562 (PRKAR1B-002) 549742-727650 protein_coding
ENST00000406797 (PRKAR1B-003) 549198-713207 protein_coding
ENST00000414568 (PRKAR1B-010) 596180-691794 protein_coding
ENST00000417852 (PRKAR1B-004) 607396-727341 protein_coding
ENST00000430040 (PRKAR1B-008) 579256-712940 protein_coding
ENST00000456696 (PRKAR1B-007) 680556-713069 protein_coding
ENST00000478198 (PRKAR1B-006) 716619-726977 processed_transcript
ENST00000488474 (PRKAR1B-005) 696713-727237 processed_transcript
ENST00000537384 (PRKAR1B-201) 549197-727341 protein_coding
ENST00000544935 (PRKAR1B-202) 549197-712940 protein_coding
ENSG00000197461 (PDGFA)
platelet-derived growth factor alpha polypeptide 		ENST00000354513 (PDGFA-002) 498309-519394 protein_coding
ENST00000400761 (PDGFA-005) 498493-518508 protein_coding
ENST00000402802 (PDGFA-001) 497258-519409 protein_coding
ENST00000405692 (PDGFA-006) 512357-520296 protein_coding
ENST00000426681 (PDGFA-004) 512445-520208 processed_transcript
ENST00000482462 (PDGFA-003) 500778-513467 retained_intron
ENSG00000223855 (FLJ44511)
uncharacterized LOC441307 		ENST00000452622 (FLJ44511-001) 520391-525232 lincRNA
ENSG00000229380 (AC147651.5)
 ENST00000453149 (AC147651.5-001) 561958-565619 antisense
ENSG00000237181 (AC147651.4)
 ENST00000429872 (AC147651.4-001) 603185-608482 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_00018I_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025856-ENSMUSG00000025855 CGP 10090 5:138976014-139150001
GeneTranscriptPositionBiotype
ENSMUSG00000025855 (Prkar1b)
protein kinase, cAMP dependent regulatory, type I beta 		ENSMUST00000026973 (Prkar1b-001) 139017306-139129759 protein_coding
ENSMUST00000110889 (Prkar1b-003) 139017317-139114054 protein_coding
ENSMUST00000110890 (Prkar1b-002) 139017308-139130386 protein_coding
ENSMUST00000129851 (Prkar1b-006) 139050662-139130159 protein_coding
ENSMUST00000130180 (Prkar1b-008) 139148054-139149957 processed_transcript
ENSMUST00000134762 (Prkar1b-005) 139108577-139130383 protein_coding
ENSMUST00000139415 (Prkar1b-010) 139018666-139023810 processed_transcript
ENSMUST00000141985 (Prkar1b-009) 139062596-139112644 protein_coding
ENSMUST00000147505 (Prkar1b-004) 139108484-139130576 protein_coding
ENSMUST00000148002 (Prkar1b-011) 139042451-139127805 protein_coding
ENSMUST00000155833 (Prkar1b-007) 139108511-139150001 protein_coding
ENSMUSG00000025856 (Pdgfa)
platelet derived growth factor, alpha 		ENSMUST00000046901 (Pdgfa-002) 138976516-138994953 protein_coding
ENSMUST00000076095 (Pdgfa-001) 138976014-138995037 protein_coding
ENSMUST00000110896 (Pdgfa-003) 138976971-138997370 protein_coding
ENSMUST00000110897 (Pdgfa-004) 138976942-138996087 protein_coding
ENSMUST00000124080 (Pdgfa-006) 138986270-138994484 processed_transcript
ENSMUST00000132051 (Pdgfa-005) 138988441-138996001 processed_transcript
ENSMUST00000144934 (Pdgfa-007) 138977145-138994281 processed_transcript
ENSMUSG00000075585 (6330403L08Rik)
RIKEN cDNA 6330403L08 gene 		ENSMUST00000100518 (6330403L08Rik-201) 138995056-139000576 lincRNA
ENSMUST00000187923 (6330403L08Rik-001) 138995056-139000577 lincRNA

Mus musculus Ensembl (GRCm38)

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Genes
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Transcripts
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00018I_0001ENSG00000164818ENST00000297440ENST00000403952ENST00000437419ENST00000438961ENST00000440747ENST00000461576ENST00000486546ENST00000491496ENSG00000188191ENST00000360274ENST00000400758ENST00000403562ENST00000406797ENST00000414568ENST00000417852ENST00000430040ENST00000456696ENST00000478198ENST00000488474ENST00000537384ENST00000544935ENSG00000197461ENST00000354513ENST00000400761ENST00000402802ENST00000405692ENST00000426681ENST00000482462ENSG00000223855ENST00000452622ENSG00000229380ENST00000453149ENSG00000237181ENST00000429872CIL_00018I_0002ENSMUSG00000025855ENSMUST00000026973ENSMUST00000110889ENSMUST00000110890ENSMUST00000129851ENSMUST00000130180ENSMUST00000134762ENSMUST00000139415ENSMUST00000141985ENSMUST00000147505ENSMUST00000148002ENSMUST00000155833ENSMUSG00000025856ENSMUST00000046901ENSMUST00000076095ENSMUST00000110896ENSMUST00000110897ENSMUST00000124080ENSMUST00000132051ENSMUST00000144934ENSMUSG00000075585ENSMUST00000100518ENSMUST00000187923
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00018I_0001ENSG00000164818ENST00000297440ENST00000437419ENST00000440747ENSG00000188191ENST00000360274ENST00000400758ENST00000403562ENST00000414568ENST00000430040ENST00000537384ENSG00000197461ENST00000354513ENST00000400761ENST00000402802ENST00000405692ENSG00000223855ENST00000452622ENSG00000229380ENST00000453149ENSG00000237181ENST00000429872CIL_00018I_0002ENSMUSG00000025855ENSMUST00000026973ENSMUST00000110889ENSMUST00000147505ENSMUST00000148002ENSMUSG00000025856ENSMUST00000046901ENSMUST00000076095ENSMUST00000110896ENSMUST00000110897ENSMUST00000144934ENSMUSG00000075585ENSMUST00000100518ENSMUST00000187923
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000164818 ENST00000297440 2.768±0.00 7.429±0.00 N/A N/A 5.664±0.00 6.596±0.00 4.561±4.13 4.516±3.60 2.235±1.82 2.575±2.10 3.830±0.71 13.828±3.35 5.760±2.11 9.328±0.00
ENST00000403952 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437419 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.349±0.00 N/A N/A N/A
ENST00000438961 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000440747 N/A N/A 1.734±0.00 N/A 0.438±0.00 1.640±0.00 N/A 0.768±0.00 0.967±0.00 0.496±0.00 1.488±0.00 11.039±9.04 6.344±3.82 10.676±0.00
ENST00000461576 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486546 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491496 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000188191 ENST00000360274 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.483±0.00 N/A N/A N/A N/A
ENST00000400758 N/A N/A N/A N/A N/A N/A N/A N/A 1.185±0.00 N/A N/A N/A N/A N/A
ENST00000403562 N/A N/A 1.771±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000406797 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000414568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.334±0.00
ENST00000417852 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430040 2.923±0.00 N/A N/A 28.164±0.00 0.879±0.00 1.754±0.00 N/A 1.827±0.00 1.055±0.00 N/A N/A 10.005±5.79 N/A 6.095±0.00
ENST00000456696 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478198 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537384 2.914±0.00 13.267±0.00 N/A 203.680±0.00 10.293±0.00 15.253±0.00 8.445±0.00 7.099±0.00 3.046±0.00 3.555±2.65 N/A 23.321±10.15 7.124±1.94 9.871±5.19
ENST00000544935 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000197461 ENST00000354513 N/A N/A 1.309±0.00 N/A 4.146±2.15 5.118±2.70 1.413±0.00 2.921±2.66 0.421±0.00 14.098±0.00 2.728±0.00 17.814±0.00 4.238±0.00 2.679±0.00
ENST00000400761 5.332±0.00 N/A 1.367±0.00 N/A N/A N/A 1.648±0.95 0.218±0.00 2.572±0.00 20.010±0.00 N/A 4.722±0.00 N/A 11.175±0.00
ENST00000402802 4.834±0.00 12.017±0.00 0.749±0.00 3.538±0.04 3.198±0.00 7.759±0.00 1.793±0.59 6.316±0.00 0.564±0.00 7.658±0.00 3.616±0.52 13.776±9.85 15.633±8.89 5.059±0.20
ENST00000405692 N/A N/A N/A N/A 5.975±0.00 N/A N/A N/A 4.768±0.00 N/A N/A N/A N/A N/A
ENST00000426681 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482462 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000223855 ENST00000452622 0.111±0.00 0.069±0.00 N/A 0.177±0.02 0.094±0.08 N/A 0.604±0.43 0.419±0.00 0.029±0.00 0.489±0.00 0.276±0.00 0.221±0.11 0.086±0.06 0.189±0.06
ENSG00000229380 ENST00000453149 N/A 0.077±0.00 N/A 0.180±0.00 0.084±0.00 N/A 0.287±0.00 0.730±0.00 N/A N/A N/A 0.349±0.13 0.128±0.00 0.611±0.08
ENSG00000237181 ENST00000429872 1.258±0.00 2.878±0.00 N/A 0.327±0.21 0.395±0.35 0.241±0.00 0.147±0.00 0.163±0.00 0.535±0.00 3.139±2.79 0.434±0.00 0.584±0.45 0.862±0.36 0.842±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025855 ENSMUST00000026973 7.304±3.98 13.788±3.19 7.073±0.16 96.113±41.42 3.011±0.72 3.763±0.79 0.975±0.37 3.261±0.24 N/A 9.819±1.30 N/A 12.439±2.74 1.984±0.94 N/A
ENSMUST00000110889 N/A 9.312±1.02 N/A N/A N/A N/A N/A 2.456±0.00 N/A N/A N/A N/A N/A 4.406±0.00
ENSMUST00000110890 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129851 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130180 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139415 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141985 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147505 N/A N/A N/A 288.138±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148002 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.089±0.00 N/A N/A
ENSMUST00000155833 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000025856 ENSMUST00000046901 6.297±3.10 14.871±4.88 5.392±0.00 N/A 5.462±1.34 35.030±1.58 3.193±0.14 4.093±0.54 0.678±0.41 28.551±2.67 4.805±0.30 9.541±3.61 8.578±9.56 1.954±0.43
ENSMUST00000076095 4.988±1.55 8.131±1.35 7.932±0.51 2.868±0.59 2.121±0.63 5.222±0.05 3.392±0.17 2.528±0.44 0.462±0.12 14.974±0.99 4.639±0.92 5.572±1.72 7.412±7.61 1.220±0.02
ENSMUST00000110896 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.402±0.42
ENSMUST00000110897 N/A N/A N/A 10.075±0.00 N/A N/A N/A N/A N/A N/A N/A 6.024±0.00 21.507±16.64 N/A
ENSMUST00000124080 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144934 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 30.724±21.70 N/A
ENSMUSG00000075585 ENSMUST00000100518 N/A N/A 4.647±0.00 1.832±0.00 0.513±0.08 N/A 0.852±0.00 N/A 0.043±0.00 N/A 1.773±0.00 1.003±0.26 0.474±0.00 0.097±0.00
ENSMUST00000187923 N/A N/A 4.438±0.00 1.693±0.00 0.479±0.08 N/A 0.817±0.00 N/A 0.042±0.00 N/A 1.767±0.00 0.888±0.28 N/A 0.094±0.00

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