C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000191_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000136689-ENSG00000125637 CGP 9606 2:113107214-113209396
GeneTranscriptPositionBiotype
ENSG00000125637 (PSD4)
pleckstrin and Sec7 domain containing 4 		ENST00000245796 (PSD4-001) 113173971-113203237 protein_coding
ENST00000409378 (PSD4-010) 113196280-113201330 protein_coding
ENST00000409656 (PSD4-004) 113185044-113201566 nonsense_mediated_decay
ENST00000418251 (PSD4-002) 113173980-113203225 retained_intron
ENST00000441564 (PSD4-003) 113173997-113209396 protein_coding
ENST00000460725 (PSD4-005) 113197195-113202912 retained_intron
ENST00000464559 (PSD4-006) 113198558-113202912 retained_intron
ENST00000465592 (PSD4-011) 113197342-113198830 retained_intron
ENST00000465917 (PSD4-012) 113157325-113183044 processed_transcript
ENST00000485525 (PSD4-007) 113173972-113185750 processed_transcript
ENST00000487574 (PSD4-009) 113196149-113198189 retained_intron
ENST00000493329 (PSD4-008) 113193848-113196607 retained_intron
ENSG00000136689 (IL1RN)
interleukin 1 receptor antagonist 		ENST00000259206 (IL1RN-001) 113117897-113134016 protein_coding
ENST00000354115 (IL1RN-002) 113117897-113134016 protein_coding
ENST00000361779 (IL1RN-003) 113117893-113134016 protein_coding
ENST00000409052 (IL1RN-004) 113111116-113134013 protein_coding
ENST00000409930 (IL1RN-005) 113127561-113133121 protein_coding
ENST00000463073 (IL1RN-006) 113111116-113115690 processed_transcript
ENST00000465812 (IL1RN-007) 113107214-113117665 processed_transcript
ENST00000472292 (IL1RN-009) 113127576-113129982 retained_intron
ENST00000486167 (IL1RN-008) 113117981-113130121 retained_intron

Homo sapiens Ensembl (GRCh38)

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CIL_000191_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026981-ENSMUSG00000026979 CGP 10090 2:24336853-24409182
GeneTranscriptPositionBiotype
ENSMUSG00000026979 (Psd4)
pleckstrin and Sec7 domain containing 4 		ENSMUST00000056641 (Psd4-002) 24385332-24408729 protein_coding
ENSMUST00000102942 (Psd4-001) 24367610-24409182 protein_coding
ENSMUST00000127242 (Psd4-007) 24386569-24394591 processed_transcript
ENSMUST00000131930 (Psd4-006) 24385353-24394305 processed_transcript
ENSMUST00000132924 (Psd4-008) 24405629-24407007 processed_transcript
ENSMUST00000133730 (Psd4-005) 24385336-24397320 processed_transcript
ENSMUST00000140303 (Psd4-009) 24401036-24403252 processed_transcript
ENSMUST00000140547 (Psd4-003) 24367580-24394258 processed_transcript
ENSMUST00000142522 (Psd4-004) 24385335-24394411 processed_transcript
ENSMUST00000166388 (Psd4-201) 24386617-24408200 protein_coding
ENSMUSG00000026981 (Il1rn)
interleukin 1 receptor antagonist 		ENSMUST00000114482 (Il1rn-002) 24345310-24350936 protein_coding
ENSMUST00000114485 (Il1rn-005) 24345288-24349807 protein_coding
ENSMUST00000114486 (Il1rn-003) 24337736-24349633 protein_coding
ENSMUST00000114487 (Il1rn-001) 24336853-24351494 protein_coding
ENSMUST00000142093 (Il1rn-004) 24336856-24349457 processed_transcript
ENSMUST00000143423 (Il1rn-006) 24345348-24346354 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000191_0001ENSG00000125637ENST00000245796ENST00000409378ENST00000409656ENST00000418251ENST00000441564ENST00000460725ENST00000464559ENST00000465592ENST00000465917ENST00000485525ENST00000487574ENST00000493329ENSG00000136689ENST00000259206ENST00000354115ENST00000361779ENST00000409052ENST00000409930ENST00000463073ENST00000465812ENST00000472292ENST00000486167CIL_000191_0002ENSMUSG00000026979ENSMUST00000056641ENSMUST00000102942ENSMUST00000127242ENSMUST00000131930ENSMUST00000132924ENSMUST00000133730ENSMUST00000140303ENSMUST00000140547ENSMUST00000142522ENSMUST00000166388ENSMUSG00000026981ENSMUST00000114482ENSMUST00000114485ENSMUST00000114486ENSMUST00000114487ENSMUST00000142093ENSMUST00000143423
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000191_0001ENSG00000125637ENST00000245796ENST00000409656ENST00000418251ENST00000441564ENST00000464559ENST00000465917ENSG00000136689ENST00000259206ENST00000354115ENST00000361779ENST00000409052ENST00000409930ENST00000486167CIL_000191_0002ENSMUSG00000026979ENSMUST00000056641ENSMUST00000102942ENSMUST00000127242ENSMUST00000131930ENSMUST00000132924ENSMUST00000133730ENSMUST00000140303ENSMUST00000140547ENSMUST00000166388ENSMUSG00000026981ENSMUST00000114482ENSMUST00000114485ENSMUST00000114486ENSMUST00000114487ENSMUST00000142093ENSMUST00000143423
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000125637 ENST00000245796 0.229±0.00 8.401±0.00 N/A 0.523±0.41 0.791±0.26 0.840±0.50 0.235±0.00 3.298±1.86 5.880±0.00 2.388±0.95 N/A 4.893±4.32 7.218±0.83 0.687±0.34
ENST00000409378 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409656 0.442±0.00 N/A N/A 1.000±0.00 1.081±0.00 1.906±0.00 0.189±0.09 N/A 0.646±0.00 1.307±0.00 0.076±0.00 10.556±6.79 6.682±0.00 1.946±0.00
ENST00000418251 N/A 3.432±0.00 N/A N/A N/A N/A N/A N/A 0.211±0.00 N/A N/A 1.249±0.00 N/A N/A
ENST00000441564 N/A N/A N/A N/A 0.255±0.00 N/A 0.044±0.02 N/A N/A N/A 0.025±0.01 1.290±0.82 0.909±0.00 N/A
ENST00000460725 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464559 0.775±0.00 10.313±0.00 N/A N/A 2.476±0.00 1.336±0.00 0.337±0.00 5.133±0.00 11.787±0.00 3.605±0.00 0.214±0.00 8.886±5.92 8.813±1.28 1.959±0.48
ENST00000465592 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465917 N/A N/A 1.789±0.00 N/A 2.040±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485525 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487574 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493329 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000136689 ENST00000259206 0.321±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000354115 N/A N/A 0.261±0.00 0.070±0.00 9.248±0.00 0.965±0.00 N/A 0.716±0.00 6.256±0.00 8.607±0.00 N/A 14.201±13.51 1.364±0.61 1.312±0.00
ENST00000361779 0.261±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.183±0.00 0.226±0.00 N/A
ENST00000409052 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.814±0.00
ENST00000409930 N/A N/A N/A N/A 0.308±0.00 N/A N/A N/A 0.369±0.00 0.680±0.00 1.139±0.00 N/A N/A N/A
ENST00000463073 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465812 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472292 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486167 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.506±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026979 ENSMUST00000056641 0.756±0.63 0.305±0.12 3.380±0.02 0.063±0.04 5.588±2.09 6.172±0.84 0.129±0.03 0.314±0.11 2.573±1.48 2.127±0.59 0.217±0.22 1.430±0.32 6.893±3.65 0.085±0.03
ENSMUST00000102942 0.534±0.28 0.119±0.06 1.933±0.01 0.023±0.00 1.714±0.17 5.712±0.93 0.048±0.02 0.066±0.01 0.585±0.41 0.713±0.14 0.030±0.00 1.357±0.53 3.640±1.95 0.100±0.00
ENSMUST00000127242 N/A 0.690±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131930 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.061±0.00 N/A N/A N/A
ENSMUST00000132924 N/A N/A N/A 2.163±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133730 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.118±0.00 N/A N/A N/A
ENSMUST00000140303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.193±0.00
ENSMUST00000140547 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.595±0.00 N/A N/A
ENSMUST00000142522 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166388 0.342±0.14 0.117±0.02 1.234±0.00 0.062±0.00 3.117±1.60 3.469±0.00 0.235±0.09 0.411±0.07 0.699±0.56 1.197±0.71 0.133±0.13 1.032±0.34 5.170±3.45 0.157±0.09
ENSMUSG00000026981 ENSMUST00000114482 0.754±0.37 0.071±0.03 1.173±0.01 0.033±0.02 0.870±0.32 13.831±3.61 0.062±0.06 0.150±0.10 2.915±2.72 5.472±1.52 0.058±0.03 0.693±0.33 1.095±0.93 N/A
ENSMUST00000114485 0.463±0.00 N/A N/A N/A 0.270±0.00 5.654±0.00 0.049±0.00 0.076±0.03 1.207±0.62 N/A N/A 0.649±0.00 1.092±0.30 0.047±0.00
ENSMUST00000114486 N/A N/A N/A N/A N/A N/A 0.051±0.00 N/A N/A N/A N/A 0.907±0.44 N/A 0.143±0.05
ENSMUST00000114487 0.171±0.11 N/A 0.666±0.33 N/A 0.234±0.00 2.759±0.34 N/A N/A 0.839±0.48 1.064±0.00 N/A 0.141±0.05 0.252±0.07 N/A
ENSMUST00000142093 N/A N/A N/A N/A N/A N/A N/A 0.198±0.00 N/A N/A N/A 1.157±0.00 N/A N/A
ENSMUST00000143423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.097±0.00 N/A N/A N/A

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