C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0001GV_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000105617-ENSG00000167608 | CGP | 9606 | 19:54155161-54173250  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000088038  (CNOT3)CCR4-NOT transcription complex, subunit 3 |
ENST00000221232 (CNOT3-001)
|
54137728-54155681 | protein_coding | |
|
ENST00000358389 (CNOT3-003)
|
54141396-54155680 | protein_coding | ||
|
ENST00000440571 (CNOT3-009)
|
54143730-54148697 | protein_coding | ||
|
ENST00000447684 (CNOT3-201)
|
54144005-54155680 | protein_coding | ||
|
ENST00000457463 (CNOT3-006)
|
54149560-54154455 | protein_coding | ||
|
ENST00000471126 (CNOT3-011)
|
54153724-54155681 | protein_coding | ||
|
ENST00000496327 (CNOT3-010)
|
54149730-54153819 | processed_transcript | ||
|
ENST00000613073 (CNOT3-005)
|
54143737-54155681 | nonsense_mediated_decay | ||
|
ENST00000617930 (CNOT3-007)
|
54153003-54155681 | retained_intron | ||
|
ENST00000618939 (CNOT3-002)
|
54137787-54155680 | retained_intron | ||
|
ENSG00000105617 (LENG1) leukocyte receptor cluster (LRC) member 1 |
ENST00000222224 (LENG1-001)
|
54155161-54159882 | protein_coding | |
|
ENSG00000167608 (TMC4) transmembrane channel-like 4 |
ENST00000446291 (TMC4-002)
|
54168171-54172752 | protein_coding | |
|
ENST00000476013 (TMC4-004)
|
54164539-54171949 | processed_transcript | ||
|
ENST00000495398 (TMC4-006)
|
54162226-54163267 | retained_intron | ||
|
ENST00000497518 (TMC4-008)
|
54164552-54168482 | retained_intron | ||
|
ENST00000611183 (TMC4-009)
|
54160108-54160649 | retained_intron | ||
|
ENST00000613492 (TMC4-003)
|
54163108-54173160 | processed_transcript | ||
|
ENST00000613723 (TMC4-010)
|
54160108-54164716 | retained_intron | ||
|
ENST00000615945 (TMC4-007)
|
54160108-54160972 | nonsense_mediated_decay | ||
|
ENST00000617472 (TMC4-011)
|
54160165-54173250 | protein_coding | ||
|
ENST00000619895 (TMC4-001)
|
54160108-54173171 | protein_coding | ||
| CIL_0001GV_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000078813-ENSMUSG00000019734 | CGP | 10090 | 7:3660098-3677524 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000019734 (Tmc4) transmembrane channel-like gene family 4 |
ENSMUST00000038743 (Tmc4-001)
|
3665790-3677510 | protein_coding | |
|
ENSMUST00000121743 (Tmc4-002)
|
3665791-3676793 | protein_coding | ||
|
ENSMUST00000130689 (Tmc4-005)
|
3675159-3677484 | retained_intron | ||
|
ENSMUST00000136678 (Tmc4-006)
|
3667442-3670482 | retained_intron | ||
|
ENSMUST00000144751 (Tmc4-003)
|
3670691-3677524 | retained_intron | ||
|
ENSMUST00000145034 (Tmc4-007)
|
3665958-3667238 | retained_intron | ||
|
ENSMUST00000148313 (Tmc4-004)
|
3670674-3676627 | retained_intron | ||
|
ENSMUSG00000035632 (Cnot3) CCR4-NOT transcription complex, subunit 3 |
ENSMUST00000038913 (Cnot3-002)
|
3645352-3661100 | protein_coding | |
|
ENSMUST00000129973 (Cnot3-005)
|
3658172-3661100 | retained_intron | ||
|
ENSMUST00000132344 (Cnot3-006)
|
3651309-3655827 | protein_coding | ||
|
ENSMUST00000135977 (Cnot3-003)
|
3651808-3658741 | nonsense_mediated_decay | ||
|
ENSMUST00000143085 (Cnot3-001)
|
3645290-3661108 | retained_intron | ||
|
ENSMUST00000144097 (Cnot3-004)
|
3658745-3661100 | retained_intron | ||
|
ENSMUST00000160200 (Cnot3-007)
|
3659390-3661100 | protein_coding | ||
|
ENSMUSG00000078813 (Leng1) leukocyte receptor cluster (LRC) member 1 |
ENSMUST00000019878 (Leng1-001)
|
3660098-3665840 | protein_coding | |
Expression Patterns
|
