C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | actinin, alpha 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000553290  |
ACTN1-020 |
ENSG00000072110 |
9606 | - |
14:68879049-68884303  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0002CK | CIL_0002CK_0001 | CGP | 14:68787660-68979440 |
| CIL_0001JZ | CIL_0001JZ_0002 | CGP | 14:68874143-69153150 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005509 | IEA | calcium ion binding |
| GO:0005515 | IEA | protein binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000021554
|
Actn1-201 | protein_coding | Mus_musculus | 0 | 667 |
|
ENSMUST00000167327
|
Actn1-202 | protein_coding | Mus_musculus | 0 | 640 |
|
ENSDART00000100217
|
actn1-201 | protein_coding | Danio_rerio | 0 | 457 |
|
ENSDART00000133740
|
actn1-002 | nonsense_mediated_decay | Danio_rerio | 0 | 457 |
|
ENSDART00000140243
|
actn1-001 | protein_coding | Danio_rerio | 0 | 457 |
|
ENSDART00000123678
|
actn1-202 | protein_coding | Danio_rerio | 0 | 440 |
|
ENSMUST00000144909
|
Actn4-002 | processed_transcript | Mus_musculus | 0 | 431 |
|
ENSMUST00000068045
|
Actn4-001 | protein_coding | Mus_musculus | 0 | 431 |
|
ENSMUST00000168193
|
Actn2-201 | protein_coding | Mus_musculus | 0 | 388 |
|
ENSMUST00000064204
|
Actn2-001 | protein_coding | Mus_musculus | 0 | 388 |
|
ENSDART00000001649
|
actn3b-001 | protein_coding | Danio_rerio | 0 | 379 |
|
ENSMUST00000143584
|
Actn4-007 | retained_intron | Mus_musculus | 0 | 333 |
|
ENSDART00000133858
|
actn1-003 | nonsense_mediated_decay | Danio_rerio | 0 | 265 |
