C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004K6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000172878-ENSG00000144355 CGP 9606 2:171999583-172089677
GeneTranscriptPositionBiotype
ENSG00000115840 (SLC25A12)
solute carrier family 25 (aspartate/glutamate carrier), member 12 		ENST00000263812 (SLC25A12-006) 171784775-171894223 nonsense_mediated_decay
ENST00000422440 (SLC25A12-001) 171784370-171894252 protein_coding
ENST00000426896 (SLC25A12-007) 171834031-171894244 nonsense_mediated_decay
ENST00000464063 (SLC25A12-010) 171855927-171999859 processed_transcript
ENST00000472070 (SLC25A12-002) 171784832-171788942 retained_intron
ENST00000472748 (SLC25A12-009) 171844369-171999855 processed_transcript
ENST00000475360 (SLC25A12-003) 171837149-171893258 nonsense_mediated_decay
ENST00000484227 (SLC25A12-008) 171855801-171999792 processed_transcript
ENST00000485880 (SLC25A12-004) 171815109-171834335 retained_intron
ENST00000494892 (SLC25A12-005) 171809425-171810280 processed_transcript
ENSG00000144355 (DLX1)
distal-less homeobox 1 		ENST00000341900 (DLX1-002) 172085536-172089677 protein_coding
ENST00000361609 (DLX1-006) 172084740-172086854 protein_coding
ENST00000361725 (DLX1-001) 172085226-172089677 protein_coding
ENST00000409492 (DLX1-005) 172085557-172087138 retained_intron
ENST00000469444 (DLX1-004) 172084749-172088051 protein_coding
ENST00000475989 (DLX1-003) 172086267-172089312 retained_intron
ENST00000550686 (DLX1-007) 172087367-172088373 processed_transcript
ENSG00000172878 (METAP1D)
methionyl aminopeptidase type 1D (mitochondrial) 		ENST00000315796 (METAP1D-001) 171999583-172082430 protein_coding
ENST00000392582 (METAP1D-006) 172065604-172072454 processed_transcript
ENST00000468537 (METAP1D-007) 172070663-172080479 processed_transcript
ENST00000488581 (METAP1D-005) 172061573-172080499 processed_transcript
ENST00000491440 (METAP1D-004) 172021799-172063750 processed_transcript
ENST00000493035 (METAP1D-002) 171999943-172064414 processed_transcript
ENST00000493742 (METAP1D-003) 171999955-172061994 processed_transcript
CIL_0004K6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041921-ENSMUSG00000041911 CGP 10090 2:71453276-71533981
GeneTranscriptPositionBiotype
ENSMUSG00000041911 (Dlx1)
distal-less homeobox 1 		ENSMUST00000037119 (Dlx1-001) 71528113-71533980 protein_coding
ENSMUST00000126400 (Dlx1-005) 71528683-71530065 protein_coding
ENSMUST00000145088 (Dlx1-003) 71529947-71533981 retained_intron
ENSMUST00000145444 (Dlx1-002) 71529853-71532519 nonsense_mediated_decay
ENSMUST00000152711 (Dlx1-004) 71529101-71530231 protein_coding
ENSMUST00000172629 (Dlx1-006) 71530780-71532689 retained_intron
ENSMUSG00000041921 (Metap1d)
methionyl aminopeptidase type 1D (mitochondrial) 		ENSMUST00000037210 (Metap1d-001) 71453276-71525191 protein_coding
ENSMUST00000123858 (Metap1d-004) 71453333-71515955 processed_transcript
ENSMUST00000124875 (Metap1d-003) 71453363-71524780 processed_transcript
ENSMUST00000138873 (Metap1d-005) 71510258-71517152 processed_transcript
ENSMUST00000139045 (Metap1d-002) 71453351-71525194 processed_transcript
ENSMUST00000148164 (Metap1d-006) 71515412-71516284 processed_transcript
ENSMUSG00000084946 (Dlx1as)
distal-less homeobox 1, antisense 		ENSMUST00000122990 (Dlx1as-002) 71524032-71527927 antisense
ENSMUST00000137251 (Dlx1as-004) 71532784-71537891 antisense
ENSMUST00000140271 (Dlx1as-001) 71516454-71527919 antisense
ENSMUST00000143767 (Dlx1as-003) 71527839-71537810 antisense
ENSMUSG00000088066 (Gm23253)
predicted gene, 23253 		ENSMUST00000157441 (Gm23253-201) 71495271-71495374 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004K6_0001ENSG00000115840ENST00000263812ENST00000422440ENST00000426896ENST00000464063ENST00000472070ENST00000472748ENST00000475360ENST00000484227ENST00000485880ENST00000494892ENSG00000144355ENST00000341900ENST00000361609ENST00000361725ENST00000409492ENST00000469444ENST00000475989ENST00000550686ENSG00000172878ENST00000315796ENST00000392582ENST00000468537ENST00000488581ENST00000491440ENST00000493035ENST00000493742CIL_0004K6_0002ENSMUSG00000041911ENSMUST00000037119ENSMUST00000126400ENSMUST00000145088ENSMUST00000145444ENSMUST00000152711ENSMUST00000172629ENSMUSG00000041921ENSMUST00000037210ENSMUST00000123858ENSMUST00000124875ENSMUST00000138873ENSMUST00000139045ENSMUST00000148164ENSMUSG00000084946ENSMUST00000122990ENSMUST00000137251ENSMUST00000140271ENSMUST00000143767ENSMUSG00000088066ENSMUST00000157441
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004K6_0001ENSG00000115840ENST00000263812ENST00000422440ENST00000426896ENSG00000144355ENST00000341900ENST00000361609ENST00000361725ENST00000409492ENST00000475989ENSG00000172878ENST00000315796ENST00000493035CIL_0004K6_0002ENSMUSG00000041911ENSMUST00000037119ENSMUST00000126400ENSMUST00000145088ENSMUST00000145444ENSMUST00000152711ENSMUST00000172629ENSMUSG00000041921ENSMUST00000037210ENSMUST00000123858ENSMUST00000124875ENSMUST00000138873ENSMUST00000139045ENSMUSG00000084946ENSMUST00000122990ENSMUST00000140271ENSMUSG00000088066ENSMUST00000157441
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115840 ENST00000263812 0.602±0.00 N/A N/A N/A 1.521±0.00 2.662±0.00 20.344±0.00 4.305±0.00 N/A 1.041±0.00 11.825±1.87 2.739±1.05 1.579±0.58 1.693±0.54
ENST00000422440 2.903±0.00 5.274±0.00 2.606±0.00 15.159±2.12 3.850±0.16 5.826±0.00 15.622±3.39 6.418±0.00 1.489±0.97 1.007±0.36 9.564±2.04 3.906±1.30 1.545±0.77 3.713±0.00
ENST00000426896 N/A N/A N/A N/A N/A N/A N/A 0.480±0.00 N/A N/A N/A N/A N/A N/A
ENST00000464063 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472070 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472748 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475360 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484227 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485880 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494892 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000144355 ENST00000341900 N/A N/A N/A 0.562±0.35 0.052±0.00 N/A N/A N/A N/A N/A N/A 0.085±0.06 N/A N/A
ENST00000361609 N/A 0.025±0.00 N/A N/A N/A N/A 0.035±0.00 N/A N/A N/A N/A 0.045±0.00 N/A 0.060±0.00
ENST00000361725 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.046±0.00
ENST00000409492 0.075±0.00 N/A N/A 1.006±0.00 N/A 0.811±0.00 N/A 0.067±0.00 N/A N/A N/A 0.246±0.00 N/A N/A
ENST00000469444 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475989 0.045±0.00 0.010±0.00 N/A 1.231±0.78 N/A 0.230±0.16 0.037±0.00 N/A 0.054±0.00 N/A N/A N/A 0.030±0.00 0.034±0.00
ENST00000550686 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000172878 ENST00000315796 0.586±0.00 2.134±0.00 N/A N/A 1.923±0.00 N/A N/A 1.394±0.52 1.476±0.00 0.838±0.00 N/A 3.090±0.83 0.641±0.17 1.565±0.10
ENST00000392582 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468537 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488581 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491440 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493035 N/A N/A 2.433±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493742 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000041911 ENSMUST00000037119 N/A 0.061±0.01 N/A 12.719±4.81 0.035±0.00 0.040±0.01 0.046±0.02 0.008±0.00 0.055±0.00 0.030±0.01 0.012±0.00 0.030±0.00 N/A 0.041±0.01
ENSMUST00000126400 N/A N/A N/A N/A N/A 0.142±0.10 0.043±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145088 N/A 0.040±0.01 0.031±0.00 20.865±14.54 0.041±0.00 0.029±0.01 N/A 0.036±0.00 0.036±0.00 N/A N/A 0.060±0.01 0.017±0.01 0.056±0.03
ENSMUST00000145444 0.049±0.00 0.182±0.09 N/A N/A 0.080±0.00 0.098±0.03 0.052±0.00 N/A N/A 0.110±0.04 N/A 0.143±0.06 N/A 0.141±0.10
ENSMUST00000152711 N/A 0.291±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.340±0.00 N/A N/A
ENSMUST00000172629 N/A 0.373±0.13 N/A 18.207±0.00 N/A 0.164±0.11 0.093±0.00 0.090±0.03 0.054±0.00 0.155±0.15 N/A 0.156±0.05 0.089±0.04 N/A
ENSMUSG00000041921 ENSMUST00000037210 9.804±0.18 2.902±0.00 12.308±2.88 9.631±3.15 5.086±0.82 2.132±0.76 13.386±1.36 12.390±1.04 11.099±4.72 3.199±0.73 14.625±0.73 8.282±5.53 3.131±1.30 3.907±1.77
ENSMUST00000123858 N/A N/A N/A 0.772±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124875 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.817±0.00 N/A
ENSMUST00000138873 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.185±0.00
ENSMUST00000139045 15.234±4.59 7.300±1.39 14.612±5.13 12.216±8.86 10.831±2.33 6.019±0.41 9.113±1.05 8.141±1.26 13.919±1.92 8.111±0.14 4.187±0.41 14.201±3.46 2.266±1.31 3.321±0.60
ENSMUST00000148164 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000084946 ENSMUST00000122990 0.178±0.11 N/A 0.116±0.00 N/A 0.098±0.00 N/A 0.141±0.04 0.202±0.09 0.154±0.06 0.167±0.00 N/A 0.255±0.03 0.171±0.03 N/A
ENSMUST00000137251 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140271 N/A N/A 0.070±0.00 N/A 0.083±0.00 N/A 0.081±0.00 N/A 0.092±0.00 N/A 0.190±0.00 0.128±0.00 0.081±0.00 N/A
ENSMUST00000143767 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000088066 ENSMUST00000157441 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.753±0.00 N/A N/A

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