C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L23A, pseudogene 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121008 Rpl23a-ps4-001 ENSMUSG00000081445 10090 + 2:132662242-132662696 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverMusclePlacentaENSMUST00000121008
Transcript ID Liver Muscle Placenta
ENSMUST00000121008 0.023±0.00 0.110±0.00 0.016±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00057F CIL_00057F_0002 CGP 2:132529082-132751055

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000332361 RP11-106A1.2-001 processed_pseudogene Homo_sapiens 0 394
ENST00000355731 RPL23A-003 protein_coding Homo_sapiens 0 394
ENST00000394935 RPL23A-004 protein_coding Homo_sapiens 0 396
ENST00000394938 RPL23A-009 protein_coding Homo_sapiens 0 396
ENST00000395315 RPL23AP32-001 processed_pseudogene Homo_sapiens 0 324
ENST00000422514 RPL23A-001 protein_coding Homo_sapiens 0 424
ENST00000437246 AC005884.1-001 processed_pseudogene Homo_sapiens 0 407
ENST00000437556 RPL23AP22-001 processed_pseudogene Homo_sapiens 0 228
ENST00000455252 RPL23AP81-001 transcribed_processed_pseudogene Homo_sapiens 1e-38 163
ENST00000467573 RPL23AP12-001 processed_pseudogene Homo_sapiens 0 359
ENST00000468281 RP4-816N1.1-001 processed_pseudogene Homo_sapiens 0 337
ENST00000469465 RPL23AP64-001 processed_pseudogene Homo_sapiens 2.94273e-44 182
ENST00000471152 RP11-3P17.3-001 processed_pseudogene Homo_sapiens 0 424
ENST00000471227 RPL23AP2-001 processed_pseudogene Homo_sapiens 0 433
ENST00000472628 RPL23A-006 protein_coding Homo_sapiens 0 398
ENST00000479658 AC114752.2-001 processed_pseudogene Homo_sapiens 0 375
ENST00000484754 RP11-4H14.1-001 processed_pseudogene Homo_sapiens 0 322
ENST00000491601 RP11-58O9.1-001 processed_pseudogene Homo_sapiens 0 339
ENST00000492925 RP11-413E6.1-001 processed_pseudogene Homo_sapiens 0 320
ENST00000496182 RPL23A-002 protein_coding Homo_sapiens 0 396
ENST00000498163 RP11-1149O23.1-001 processed_pseudogene Homo_sapiens 0 300
ENST00000498752 RP11-472I20.1-001 processed_pseudogene Homo_sapiens 0 390
ENST00000569211 CTC-661I16.1-001 processed_pseudogene Homo_sapiens 0 292
ENST00000578181 RPL23A-011 protein_coding Homo_sapiens 0 385
ENST00000592379 AD000091.3-001 processed_pseudogene Homo_sapiens 0 220

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