C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005MH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000144452-ENSG00000138363 CGP 9606 2:214931542-215349773
GeneTranscriptPositionBiotype
ENSG00000138363 (ATIC)
5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase 		ENST00000236959 (ATIC-001) 215311817-215349763 protein_coding
ENST00000413174 (ATIC-009) 215312498-215326978 protein_coding
ENST00000426233 (ATIC-013) 215336022-215349298 protein_coding
ENST00000427397 (ATIC-008) 215312130-215335004 nonsense_mediated_decay
ENST00000435675 (ATIC-007) 215312091-215349763 protein_coding
ENST00000442048 (ATIC-015) 215348684-215349773 protein_coding
ENST00000443953 (ATIC-002) 215312072-215349763 nonsense_mediated_decay
ENST00000444305 (ATIC-004) 215311956-215326056 nonsense_mediated_decay
ENST00000446622 (ATIC-012) 215334917-215347652 protein_coding
ENST00000459796 (ATIC-011) 215338870-215345587 retained_intron
ENST00000467388 (ATIC-014) 215338769-215347240 retained_intron
ENST00000478734 (ATIC-003) 215348985-215349756 retained_intron
ENST00000479093 (ATIC-016) 215338766-215349733 retained_intron
ENST00000488712 (ATIC-006) 215311992-215326139 retained_intron
ENSG00000144452 (ABCA12)
ATP-binding cassette, sub-family A (ABC1), member 12 		ENST00000272895 (ABCA12-001) 214931542-215138428 protein_coding
ENST00000389661 (ABCA12-002) 214932622-215032086 protein_coding
ENST00000412081 (ABCA12-003) 215075492-215138404 protein_coding
ENSG00000227769 (AC072062.3)
 ENST00000419251 (AC072062.3-002) 215022560-215023118 antisense
ENST00000437897 (AC072062.3-001) 215021998-215042256 antisense
ENST00000595058 (AC072062.3-004) 215022577-215023400 antisense
ENST00000602182 (AC072062.3-003) 215022577-215023118 antisense
ENST00000615813 (AC072062.3-005) 215029280-215042379 antisense
ENSG00000229267 (AC072062.1)
 ENST00000420134 (AC072062.1-002) 214960392-214962062 antisense
ENST00000607412 (AC072062.1-001) 214810229-214963274 antisense
ENSG00000237571 (AC073284.4)
 ENST00000448086 (AC073284.4-001) 215274992-215277947 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0005MH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000050296-ENSMUSG00000026192 CGP 10090 1:71242276-71579631
GeneTranscriptPositionBiotype
ENSMUSG00000026192 (Atic)
5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase 		ENSMUST00000027384 (Atic-001) 71557150-71579631 protein_coding
ENSMUST00000136443 (Atic-003) 71557213-71563198 retained_intron
ENSMUST00000148077 (Atic-002) 71557179-71563198 retained_intron
ENSMUST00000154855 (Atic-005) 71568866-71572960 retained_intron
ENSMUST00000155769 (Atic-004) 71557179-71573363 retained_intron
ENSMUST00000187982 (Atic-006) 71557179-71559951 retained_intron
ENSMUSG00000050296 (Abca12)
ATP-binding cassette, sub-family A (ABC1), member 12 		ENSMUST00000087268 (Abca12-001) 71242276-71414910 protein_coding
ENSMUST00000187097 (Abca12-004) 71312166-71414910 retained_intron
ENSMUST00000188752 (Abca12-005) 71290013-71307087 retained_intron
ENSMUST00000189102 (Abca12-002) 71361743-71414896 retained_intron
ENSMUST00000191520 (Abca12-003) 71332618-71335786 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

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Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005MH_0001ENSG00000138363ENST00000236959ENST00000413174ENST00000426233ENST00000427397ENST00000435675ENST00000442048ENST00000443953ENST00000444305ENST00000446622ENST00000459796ENST00000467388ENST00000478734ENST00000479093ENST00000488712ENSG00000144452ENST00000272895ENST00000389661ENST00000412081ENSG00000227769ENST00000419251ENST00000437897ENST00000595058ENST00000602182ENST00000615813ENSG00000229267ENST00000420134ENST00000607412ENSG00000237571ENST00000448086CIL_0005MH_0002ENSMUSG00000026192ENSMUST00000027384ENSMUST00000136443ENSMUST00000148077ENSMUST00000154855ENSMUST00000155769ENSMUST00000187982ENSMUSG00000050296ENSMUST00000087268ENSMUST00000187097ENSMUST00000188752ENSMUST00000189102ENSMUST00000191520
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005MH_0001ENSG00000138363ENST00000236959ENST00000426233ENST00000435675ENST00000443953ENST00000446622ENST00000467388ENST00000478734ENST00000479093ENSG00000144452ENST00000272895ENST00000389661ENSG00000227769ENST00000419251ENST00000437897ENST00000595058ENST00000615813ENSG00000229267ENST00000420134ENST00000607412ENSG00000237571ENST00000448086CIL_0005MH_0002ENSMUSG00000026192ENSMUST00000027384ENSMUST00000155769ENSMUSG00000050296ENSMUST00000087268ENSMUST00000187097ENSMUST00000188752ENSMUST00000189102ENSMUST00000191520
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000138363 ENST00000236959 8.077±0.00 9.280±0.00 N/A 0.294±0.00 7.895±0.00 4.491±0.00 2.435±1.92 4.240±2.39 5.645±0.00 3.810±0.00 15.723±0.00 13.943±1.07 21.542±6.97 7.042±0.00
ENST00000413174 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000426233 N/A N/A N/A N/A 1.444±0.00 N/A N/A N/A N/A 2.081±0.00 N/A N/A N/A N/A
ENST00000427397 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000435675 N/A N/A N/A N/A 1.145±0.00 0.813±0.00 2.080±0.00 N/A N/A N/A 3.732±0.00 4.219±0.00 4.420±0.00 N/A
ENST00000442048 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443953 8.163±0.00 13.302±0.00 N/A 20.954±0.00 10.991±0.00 6.616±0.00 7.568±0.00 11.988±0.00 8.222±0.00 3.175±0.00 4.070±0.00 5.178±0.95 6.367±0.00 23.050±0.00
ENST00000444305 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446622 N/A N/A N/A 1.601±0.00 N/A N/A N/A N/A N/A N/A N/A 4.596±0.00 N/A N/A
ENST00000459796 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467388 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.485±0.00 N/A N/A
ENST00000478734 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.531±0.00 N/A N/A N/A
ENST00000479093 N/A 21.997±0.00 N/A 8.002±6.73 3.799±0.00 13.075±0.00 N/A 10.847±8.25 7.844±5.52 3.483±0.00 N/A 57.150±35.53 43.771±33.47 27.363±6.42
ENST00000488712 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000144452 ENST00000272895 N/A N/A 0.021±0.00 N/A 0.014±0.01 0.062±0.00 0.006±0.00 0.030±0.00 0.019±0.00 N/A N/A 0.035±0.02 0.134±0.04 0.126±0.01
ENST00000389661 N/A 0.002±0.00 N/A 0.087±0.00 0.004±0.00 0.037±0.00 0.003±0.00 N/A N/A 0.001±0.00 0.005±0.00 0.062±0.00 N/A N/A
ENST00000412081 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000227769 ENST00000419251 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.078±0.00 N/A 0.734±0.24
ENST00000437897 N/A N/A 0.409±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.007±0.00 N/A 0.077±0.00
ENST00000595058 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.696±0.00 N/A N/A N/A N/A
ENST00000602182 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615813 0.304±0.00 0.555±0.00 N/A 0.700±0.00 0.455±0.00 0.474±0.00 0.157±0.00 0.123±0.00 0.295±0.00 0.291±0.00 0.021±0.00 0.143±0.00 N/A 0.226±0.00
ENSG00000229267 ENST00000420134 N/A N/A N/A N/A N/A 0.113±0.00 N/A N/A N/A N/A N/A 0.053±0.00 N/A 0.443±0.00
ENST00000607412 N/A N/A 0.066±0.00 0.159±0.00 0.228±0.00 0.082±0.00 0.028±0.00 0.127±0.01 N/A N/A N/A 0.016±0.00 0.024±0.01 0.582±0.16
ENSG00000237571 ENST00000448086 0.075±0.00 N/A N/A 0.083±0.00 0.117±0.00 N/A N/A 0.038±0.00 N/A N/A N/A N/A N/A 0.035±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026192 ENSMUST00000027384 15.931±3.25 5.752±0.91 17.709±2.02 10.660±2.03 8.802±1.33 9.311±0.94 6.421±0.31 7.842±1.34 15.156±10.87 6.778±1.02 7.478±1.46 14.207±4.11 21.897±12.47 3.018±0.41
ENSMUST00000136443 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148077 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154855 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155769 9.845±3.93 21.096±2.91 N/A N/A 11.150±3.27 10.385±1.61 2.301±0.32 3.133±0.68 3.432±2.09 4.353±0.91 N/A 23.582±2.69 N/A 1.293±0.40
ENSMUST00000187982 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000050296 ENSMUST00000087268 N/A N/A N/A 0.042±0.01 0.216±0.13 0.934±0.19 0.407±0.08 N/A 0.001±0.00 0.649±0.64 0.022±0.00 0.013±0.00 0.063±0.07 0.100±0.02
ENSMUST00000187097 N/A N/A N/A N/A 0.035±0.01 N/A N/A N/A 0.001±0.00 N/A N/A 0.006±0.00 N/A N/A
ENSMUST00000188752 N/A N/A N/A N/A 0.057±0.00 N/A N/A N/A N/A N/A N/A N/A 0.007±0.00 N/A
ENSMUST00000189102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.010±0.00 N/A
ENSMUST00000191520 0.017±0.01 N/A N/A N/A 0.121±0.00 N/A N/A N/A 0.038±0.01 0.057±0.00 N/A 0.082±0.07 0.004±0.00 N/A

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