C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000475247 RP11-214O14.1-001 ENSG00000241651 9606 - 4:128069014-128069612 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLungMuscleOvaryTestisENST00000475247
Transcript ID Adipose Adrenal Brain Breast Colon Heart Lung Muscle Ovary Testis
ENST00000475247 0.080±0.00 0.139±0.00 0.100±0.00 0.127±0.01 0.052±0.00 0.050±0.00 0.311±0.21 0.095±0.00 0.300±0.19 0.025±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YG CIL_0008YG_0001 VISTA 4:128057618-128659090
CIL_0006YL CIL_0006YL_0002 CGP 4:128061268-128288829

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000105169 Gm4294-201 processed_pseudogene Mus_musculus 0 593
ENSMUST00000088480 Rpl15-ps3-001 processed_pseudogene Mus_musculus 0 593
ENSMUST00000112598 Rpl15-005 protein_coding Mus_musculus 0 593
ENSMUST00000079419 Rpl15-004 protein_coding Mus_musculus 0 593
ENSMUST00000100799 Rpl15-002 protein_coding Mus_musculus 0 593
ENSMUST00000080281 Rpl15-001 protein_coding Mus_musculus 0 593
ENSMUST00000184247 Rpl15-ps2-001 processed_pseudogene Mus_musculus 0 588
ENSMUST00000081993 Gm10020-201 protein_coding Mus_musculus 0 588
ENSMUST00000119496 Gm10224-001 processed_pseudogene Mus_musculus 0 582
ENSMUST00000120953 Gm13413-001 processed_pseudogene Mus_musculus 0 525
ENSMUST00000097103 Gm8420-001 processed_pseudogene Mus_musculus 0 525
ENSMUST00000121621 Gm12726-001 processed_pseudogene Mus_musculus 0 521
ENSMUST00000189382 RP23-277E3.1-001 processed_pseudogene Mus_musculus 0 514
ENSMUST00000117717 Gm14094-001 processed_pseudogene Mus_musculus 0 483
ENSMUST00000121557 Gm13688-001 processed_pseudogene Mus_musculus 0 479
ENSMUST00000117231 Gm11191-001 processed_pseudogene Mus_musculus 0 451
ENSMUST00000118944 Gm15400-001 processed_pseudogene Mus_musculus 0 409
ENSMUST00000073317 Gm5292-001 processed_pseudogene Mus_musculus 0 383
ENSMUST00000120694 Rpl15-ps1-001 processed_pseudogene Mus_musculus 0 359
ENSMUST00000118237 Gm11500-001 processed_pseudogene Mus_musculus 0 357
ENSMUST00000132957 Gm15733-001 processed_pseudogene Mus_musculus 9.80909e-45 183
ENSMUST00000159873 Gm3329-001 processed_pseudogene Mus_musculus 1e-39 167
ENSMUST00000122372 Rpl15-ps4-001 processed_pseudogene Mus_musculus 1e-34 150

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