| Transcript ID | Brain | Heart | Kidney | Liver |
|---|---|---|---|---|
| ENSDART00000090994 | 2.368±0.11 | 0.157±0.00 | 0.180±0.00 | 0.007±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | sodium channel, voltage-gated, type I like, alpha b | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSDART00000090994  |
scn1lab-201 |
ENSDARG00000062744 |
7955 | - |
6:10158986-10216572  |
protein_coding |
Expression Patterns
|
Conserved Regions |
|---|
| Gene is not located within a conserved region. |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0001518 | IEA | voltage-gated sodium channel complex |
| GO:0005216 | IEA | ion channel activity |
| GO:0005244 | IEA | voltage-gated ion channel activity |
| GO:0005248 | IEA | voltage-gated sodium channel activity |
| GO:0005272 | IEA | sodium channel activity |
| GO:0005515 | IEA | protein binding |
| GO:0006810 | IEA | transport |
| GO:0006811 | IEA | ion transport |
| GO:0006814 | IEA | sodium ion transport |
| GO:0016020 | IEA | membrane |
| GO:0016021 | IEA | integral to membrane |
| GO:0034765 | IEA | regulation of ion transmembrane transport |
| GO:0055085 | IEA | transmembrane transport |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000077489
|
Scn1a-004 | protein_coding | Mus_musculus | 0 | 1247 |
|
ENSMUST00000082209
|
Scn8a-201 | protein_coding | Mus_musculus | 0 | 675 |
|
ENSMUST00000094951
|
Scn1a-005 | protein_coding | Mus_musculus | 0 | 1247 |
|
ENSMUST00000100063
|
Scn9a-201 | protein_coding | Mus_musculus | 0 | 466 |
|
ENSMUST00000100064
|
Scn9a-001 | protein_coding | Mus_musculus | 0 | 466 |
|
ENSMUST00000108908
|
Scn8a-203 | protein_coding | Mus_musculus | 0 | 675 |
|
ENSMUST00000108909
|
Scn8a-204 | protein_coding | Mus_musculus | 0 | 675 |
|
ENSMUST00000108910
|
Scn8a-205 | protein_coding | Mus_musculus | 0 | 675 |
|
ENSMUST00000112354
|
Scn9a-002 | protein_coding | Mus_musculus | 0 | 466 |
|
ENSMUST00000112366
|
Scn1a-001 | protein_coding | Mus_musculus | 0 | 1247 |
|
ENSMUST00000112371
|
Scn1a-201 | protein_coding | Mus_musculus | 0 | 1247 |
|
ENSMUST00000164384
|
Scn9a-202 | protein_coding | Mus_musculus | 0 | 466 |
|
ENSMUST00000169900
|
Scn9a-203 | protein_coding | Mus_musculus | 0 | 466 |
|
ENST00000283254
|
SCN3A-001 | protein_coding | Homo_sapiens | 0 | 1243 |
|
ENST00000283256
|
SCN2A-001 | protein_coding | Homo_sapiens | 0 | 1352 |
|
ENST00000303354
|
SCN9A-201 | protein_coding | Homo_sapiens | 0 | 370 |
|
ENST00000303395
|
SCN1A-001 | protein_coding | Homo_sapiens | 0 | 514 |
|
ENST00000360093
|
SCN3A-201 | protein_coding | Homo_sapiens | 0 | 1243 |
|
ENST00000375405
|
SCN1A-002 | protein_coding | Homo_sapiens | 0 | 688 |
|
ENST00000375427
|
SCN2A-002 | protein_coding | Homo_sapiens | 0 | 1352 |
|
ENST00000375437
|
SCN2A-201 | protein_coding | Homo_sapiens | 0 | 1352 |
|
ENST00000409050
|
SCN1A-003 | protein_coding | Homo_sapiens | 0 | 514 |
|
ENST00000409101
|
SCN3A-002 | protein_coding | Homo_sapiens | 0 | 1243 |
|
ENST00000409435
|
SCN9A-004 | protein_coding | Homo_sapiens | 0 | 370 |
|
ENST00000409672
|
SCN9A-001 | protein_coding | Homo_sapiens | 0 | 370 |
|
ENST00000423058
|
SCN1A-201 | protein_coding | Homo_sapiens | 0 | 514 |
|
ENST00000435607
|
SCN4A-201 | protein_coding | Homo_sapiens | 0 | 961 |
|
ENST00000440431
|
SCN3A-004 | protein_coding | Homo_sapiens | 0 | 529 |
|
ENST00000578147
|
SCN4A-001 | protein_coding | Homo_sapiens | 0 | 955 |
