| Transcript ID | Brain | Heart | Liver | Muscle |
|---|---|---|---|---|
| ENSDART00000102782 | 33.970±30.12 | 0.069±0.01 | 0.078±0.00 | 2.169±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | glutamate receptor, ionotropic, AMPA 2a | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSDART00000102782  |
gria2a-001 |
ENSDARG00000070173 |
7955 | - |
1:20115714-20192523  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007F1 | CIL_0007F1_0001 | CGP | 1:20115714-20266484 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0004872 | IEA | receptor activity |
| GO:0004970 | IEA | ionotropic glutamate receptor activity |
| GO:0005215 | IEA | transporter activity |
| GO:0005216 | IEA | ion channel activity |
| GO:0005234 | IEA | extracellular-glutamate-gated ion channel activity |
| GO:0005886 | IEA | plasma membrane |
| GO:0006810 | IEA | transport |
| GO:0006811 | IEA | ion transport |
| GO:0016020 | IEA | membrane |
| GO:0016021 | IEA | integral to membrane |
| GO:0030054 | IEA | cell junction |
| GO:0045202 | IEA | synapse |
| GO:0045211 | IEA | postsynaptic membrane |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000027020
|
Gria4-201 | protein_coding | Mus_musculus | 0 | 773 |
|
ENSMUST00000075316
|
Gria2-201 | protein_coding | Mus_musculus | 0 | 1424 |
|
ENSMUST00000094179
|
Gria1-005 | protein_coding | Mus_musculus | 0 | 824 |
|
ENSMUST00000107745
|
Gria2-202 | protein_coding | Mus_musculus | 0 | 1341 |
|
ENSMUST00000115103
|
Gria3-004 | protein_coding | Mus_musculus | 0 | 676 |
|
ENSMUST00000139965
|
Gria3-002 | nonsense_mediated_decay | Mus_musculus | 0 | 601 |
|
ENSMUST00000156721
|
Gria3-003 | retained_intron | Mus_musculus | 0 | 206 |
|
ENSMUST00000165288
|
Gria3-201 | protein_coding | Mus_musculus | 0 | 676 |
|
ENST00000264426
|
GRIA2-002 | protein_coding | Homo_sapiens | 0 | 1402 |
|
ENST00000285900
|
GRIA1-001 | protein_coding | Homo_sapiens | 0 | 837 |
|
ENST00000323661
|
GRIA2-006 | nonsense_mediated_decay | Homo_sapiens | 4e-26 | 124 |
|
ENST00000393127
|
GRIA4-202 | protein_coding | Homo_sapiens | 0 | 800 |
|
ENST00000503980
|
GRIA2-013 | retained_intron | Homo_sapiens | 0 | 243 |
|
ENST00000518142
|
GRIA1-013 | protein_coding | Homo_sapiens | 0 | 837 |
|
ENST00000518783
|
GRIA1-007 | protein_coding | Homo_sapiens | 0 | 837 |
|
ENST00000521843
|
GRIA1-010 | protein_coding | Homo_sapiens | 0 | 837 |
|
ENST00000525187
|
GRIA4-006 | protein_coding | Homo_sapiens | 0 | 800 |
|
ENST00000525942
|
GRIA4-007 | nonsense_mediated_decay | Homo_sapiens | 0 | 222 |
|
ENST00000533094
|
GRIA4-008 | processed_transcript | Homo_sapiens | 0 | 233 |
|
ENST00000541091
|
GRIA3-002 | protein_coding | Homo_sapiens | 0 | 645 |
|
ENST00000620581
|
GRIA3-201 | protein_coding | Homo_sapiens | 0 | 556 |
|
ENST00000622768
|
GRIA3-202 | protein_coding | Homo_sapiens | 0 | 645 |
