C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glutamate receptor, ionotropic, AMPA 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000525942 GRIA4-007 ENSG00000152578 9606 + 11:105933808-105974430 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000139965 Gria3-002 nonsense_mediated_decay Mus_musculus 0 582
ENSMUST00000027020 Gria4-201 protein_coding Mus_musculus 0 460
ENSMUST00000063508 Gria4-202 protein_coding Mus_musculus 0 427
ENSMUST00000165288 Gria3-201 protein_coding Mus_musculus 0 333
ENSMUST00000115103 Gria3-004 protein_coding Mus_musculus 0 333
ENSDART00000016916 gria4b-001 protein_coding Danio_rerio 0 303
ENSDART00000043180 gria3b-001 protein_coding Danio_rerio 0 300
ENSMUST00000075316 Gria2-201 protein_coding Mus_musculus 0 291
ENSDART00000134602 gria2b-003 processed_transcript Danio_rerio 0 274
ENSDART00000064617 gria2b-001 protein_coding Danio_rerio 0 274
ENSMUST00000107745 Gria2-202 protein_coding Mus_musculus 0 272
ENSMUST00000094179 Gria1-005 protein_coding Mus_musculus 0 272
ENSDART00000074671 gria2b-002 protein_coding Danio_rerio 0 267
ENSMUST00000076349 Gria3-001 protein_coding Mus_musculus 0 255
ENSDART00000077805 gria2a-002 protein_coding Danio_rerio 0 250
ENSDART00000021437 gria1a-001 protein_coding Danio_rerio 0 239
ENSDART00000044735 gria1b-001 protein_coding Danio_rerio 0 228
ENSDART00000102782 gria2a-001 protein_coding Danio_rerio 0 222
ENSDART00000123713 gria1b-003 protein_coding Danio_rerio 0 198
ENSMUST00000156721 Gria3-003 retained_intron Mus_musculus 2.8026e-45 185

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