C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone cluster 2, H2bb
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000051089 Hist2h2bb-201 ENSMUSG00000050936 10090 + 3:96269721-96279001 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartKidneyLiverOvaryPlacentaTestisENSMUST00000051089
Transcript ID Bladder Brain Breast Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000051089 0.060±0.03 0.545±0.03 0.032±0.00 0.025±0.00 0.050±0.01 1.203±0.67 0.024±0.00 1.824±1.25 0.172±0.05

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000289316 HIST1H2BD-001 protein_coding Homo_sapiens 0 254
ENST00000314332 HIST1H2BC-003 protein_coding Homo_sapiens 0 254
ENST00000339812 HIST1H2BJ-003 protein_coding Homo_sapiens 0 248
ENST00000356950 HIST1H2BK-001 protein_coding Homo_sapiens 0 270
ENST00000369167 HIST2H2BF-001 protein_coding Homo_sapiens 0 294
ENST00000369385 HIST2H2BD-001 processed_pseudogene Homo_sapiens 0 219
ENST00000377401 HIST1H2BL-001 protein_coding Homo_sapiens 0 261
ENST00000377733 HIST1H2BI-001 protein_coding Homo_sapiens 0 254
ENST00000377777 HIST1H2BD-002 protein_coding Homo_sapiens 0 254
ENST00000396980 HIST1H2BN-201 protein_coding Homo_sapiens 0 226
ENST00000396984 HIST1H2BC-002 protein_coding Homo_sapiens 0 254
ENST00000412169 HIST2H2BA-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 255
ENST00000419683 HIST1H2BPS3-001 processed_pseudogene Homo_sapiens 1e-22 110
ENST00000430394 HIST2H2BA-002 processed_transcript Homo_sapiens 0 261
ENST00000449108 HIST2H2BB-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 267
ENST00000449538 HIST1H2BN-002 nonsense_mediated_decay Homo_sapiens 0 226
ENST00000464664 CH507-42P11.1-001 processed_pseudogene Homo_sapiens 0 270
ENST00000469483 HIST2H2BF-002 processed_transcript Homo_sapiens 0 294
ENST00000498492 HIST2H2BC-001 processed_pseudogene Homo_sapiens 0 220
ENST00000545683 HIST2H2BF-201 protein_coding Homo_sapiens 0 294
ENST00000599962 H2BFS-001 protein_coding Homo_sapiens 0 270
ENST00000606613 HIST1H2BN-003 protein_coding Homo_sapiens 0 226
ENST00000607124 HIST1H2BJ-001 protein_coding Homo_sapiens 0 248
ENST00000609585 HIST2H2BB-002 processed_transcript Homo_sapiens 0 272
ENST00000612898 HIST1H2BN-001 protein_coding Homo_sapiens 0 226
ENST00000614097 HIST1H2BE-001 protein_coding Homo_sapiens 0 248

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