C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone cluster 2, H2bc (pseudogene)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000498492 HIST2H2BC-001 ENSG00000203819 9606 - 1:149850193-149850772 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000498492
Transcript ID Adrenal Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000498492 0.380±0.00 0.156±0.00 0.160±0.00 0.387±0.23 0.116±0.00 0.192±0.00 0.048±0.00 0.160±0.00 0.156±0.00 0.319±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000UD CIL_0000UD_0004 CGP 1:149842188-149886652
CIL_0000UC CIL_0000UC_0005 CGP 1:149842204-149886652

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000018246 Hist1h2bc-001 protein_coding Mus_musculus 0 532
ENSMUST00000110467 Hist1h2br-001 protein_coding Mus_musculus 0 529
ENSMUST00000110469 Hist1h2bq-001 protein_coding Mus_musculus 0 529
ENSMUST00000079251 Hist1h2bg-001 protein_coding Mus_musculus 0 527
ENSMUST00000105106 Hist1h2bf-001 protein_coding Mus_musculus 0 523
ENSMUST00000180288 Hist1h2br-201 protein_coding Mus_musculus 0 521
ENSMUST00000051091 Hist1h2be-001 protein_coding Mus_musculus 0 521
ENSMUST00000091704 Hist1h2be-002 protein_coding Mus_musculus 0 521
ENSMUST00000078156 Hist1h2bh-001 protein_coding Mus_musculus 0 521
ENSMUST00000091749 Hist1h2bq-201 protein_coding Mus_musculus 0 521
ENSMUST00000110452 Hist1h2bj-001 protein_coding Mus_musculus 0 520
ENSMUST00000091756 Hist1h2bl-001 protein_coding Mus_musculus 0 518
ENSMUST00000110455 Hist1h2bk-001 protein_coding Mus_musculus 0 514
ENSMUST00000091709 Hist1h2bn-001 protein_coding Mus_musculus 0 512
ENSMUST00000102982 Hist1h2bp-001 protein_coding Mus_musculus 0 510
ENSMUST00000110476 Hist1h2bm-001 protein_coding Mus_musculus 0 507
ENSMUST00000110473 Hist1h2bp-002 protein_coding Mus_musculus 0 499
ENSMUST00000099703 Hist1h2bb-001 protein_coding Mus_musculus 0 475
ENSMUST00000078267 Hist3h2ba-001 protein_coding Mus_musculus 0 457
ENSMUST00000117558 Hist3h2bb-ps-001 processed_pseudogene Mus_musculus 0 435
ENSMUST00000117835 Gm12957-001 processed_pseudogene Mus_musculus 0 431
ENSMUST00000090781 Hist2h2be-001 protein_coding Mus_musculus 0 427
ENSMUST00000052776 Hist1h2ba-001 protein_coding Mus_musculus 0 412
ENSDART00000128030 zgc:112234-204 protein_coding Danio_rerio 0 411
ENSMUST00000177113 Hist2h2bb-001 protein_coding Mus_musculus 0 396
ENSDART00000115210 ano9a-001 protein_coding Danio_rerio 0 383
ENSDART00000114598 ano9a-001 protein_coding Danio_rerio 0 383
ENSDART00000156508 zgc:173587-001 protein_coding Danio_rerio 0 361
ENSDART00000126590 zgc:173587-201 protein_coding Danio_rerio 0 357
ENSDART00000130784 zgc:173587-202 protein_coding Danio_rerio 0 357
ENSDART00000154655 zgc:171759-001 protein_coding Danio_rerio 0 355
ENSDART00000146289 zgc:171759-208 protein_coding Danio_rerio 0 351
ENSDART00000128017 zgc:171759-001 protein_coding Danio_rerio 0 344
ENSDART00000114767 CABZ01086354.1-201 protein_coding Danio_rerio 0 340
ENSDART00000073457 zgc:194989-001 protein_coding Danio_rerio 0 339
ENSDART00000155850 zgc:171759-001 protein_coding Danio_rerio 0 333
ENSDART00000050237 zgc:171759-201 protein_coding Danio_rerio 0 331
ENSMUST00000051089 Hist2h2bb-201 protein_coding Mus_musculus 0 220
ENSDART00000143995 si:ch211-190p8.2-001 protein_coding Danio_rerio 0 204
ENSDART00000105575 zgc:92591-201 protein_coding Danio_rerio 0 198

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