C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12816
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118069 Gm12816-001 ENSMUSG00000083011 10090 - 4:112955075-112956286 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENSMUST00000118069
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000118069 0.119±0.10 0.085±0.00 0.016±0.01 0.141±0.13 0.044±0.00 0.141±0.00 0.031±0.00 0.055±0.03 0.311±0.58 0.090±0.01 0.115±0.02 0.092±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000XH CIL_0000XH_000F CGP 4:112804616-113999503

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216146 RPL3-001 protein_coding Homo_sapiens 0 1426
ENST00000401609 RPL3-003 protein_coding Homo_sapiens 0 1423
ENST00000402527 RPL3-009 protein_coding Homo_sapiens 0 1142
ENST00000413027 RPL3P2-001 processed_pseudogene Homo_sapiens 0 1262
ENST00000414649 RPL3P2-001 processed_pseudogene Homo_sapiens 0 1262
ENST00000417615 RPL3P4-001 processed_pseudogene Homo_sapiens 0 507
ENST00000420536 RPL3-014 nonsense_mediated_decay Homo_sapiens 1.96182e-44 183
ENST00000427905 RPL3-011 protein_coding Homo_sapiens 0 813
ENST00000428665 RPL3P2-001 processed_pseudogene Homo_sapiens 0 1267
ENST00000432928 RPL3P8-001 processed_pseudogene Homo_sapiens 0 870
ENST00000434677 RPL3P2-001 processed_pseudogene Homo_sapiens 0 1249
ENST00000437106 RPL3P1-001 processed_pseudogene Homo_sapiens 0 1026
ENST00000445022 RPL3P2-001 processed_pseudogene Homo_sapiens 0 1243
ENST00000449035 RPL3P2-001 processed_pseudogene Homo_sapiens 0 1273
ENST00000453303 RPL3-012 protein_coding Homo_sapiens 0 974
ENST00000454216 RPL3P2-001 processed_pseudogene Homo_sapiens 0 1243
ENST00000463217 RPL3P9-001 processed_pseudogene Homo_sapiens 0 1170
ENST00000464182 RPL3-019 retained_intron Homo_sapiens 0 222
ENST00000465618 RPL3-002 processed_transcript Homo_sapiens 0 1014
ENST00000467105 RPL3-004 retained_intron Homo_sapiens 0 222
ENST00000467870 RPL3P3-001 processed_pseudogene Homo_sapiens 0 1188
ENST00000473638 RPL3-018 retained_intron Homo_sapiens 0 274
ENST00000474162 RPL3P6-001 processed_pseudogene Homo_sapiens 0 1070
ENST00000484358 RPL3-015 retained_intron Homo_sapiens 0 407

Loading