Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	eukaryotic translation initiation factor 4A1 pseudogene 5
ENST00000428062	EIF4A1P5-001	ENSG00000226161	9606	-	13:36938400-36939494	processed_pseudogene

Expression Patterns

Transcript ID	Adipose	Adrenal	Breast	Colon	Heart	Ovary	Testis
ENST00000428062	0.012±0.00	0.039±0.00	0.106±0.09	0.049±0.00	0.012±0.00	0.027±0.00	0.047±0.00

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0000PF	CIL_0000PF_0002	CGP	13:36844831-37000261

Gene Ontology
GO ID	Evidence Type	GO Description
No GO terms available.

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENSMUST00000163666	Eif4a1-001	protein_coding	Mus_musculus	0	1293
ENSMUST00000122226	Eif4a-ps4-001	processed_pseudogene	Mus_musculus	0	1288
ENSMUST00000072982	Gm5513-201	processed_pseudogene	Mus_musculus	0	1199
ENSMUST00000120460	Gm12136-001	processed_pseudogene	Mus_musculus	0	917
ENSMUST00000128519	Eif4a1-012	retained_intron	Mus_musculus	0	822
ENSMUST00000118589	Gm15568-001	processed_pseudogene	Mus_musculus	0	771
ENSMUST00000121818	Gm12920-001	processed_pseudogene	Mus_musculus	0	752
ENSMUST00000102589	Eif4a1-013	nonsense_mediated_decay	Mus_musculus	0	728
ENSMUST00000121086	Gm11258-001	processed_pseudogene	Mus_musculus	0	669
ENSMUST00000123995	Eif4a1-002	retained_intron	Mus_musculus	0	475
ENSMUST00000139299	Eif4a1-006	processed_transcript	Mus_musculus	0	387
ENSMUST00000140310	Eif4a1-007	processed_transcript	Mus_musculus	0	379
ENSMUST00000142214	Eif4a1-003	processed_transcript	Mus_musculus	0	344
ENSMUST00000127677	Eif4a1-008	processed_transcript	Mus_musculus	0	302
ENSMUST00000133067	Eif4a1-009	processed_transcript	Mus_musculus	0	252
ENSMUST00000142348	Eif4a1-010	processed_transcript	Mus_musculus	1.00053e-42	178

Loading