C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 4A1 pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000422633 EIF4A1P2-001 ENSG00000235001 9606 - Y:5337745-5338964 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeColonKidneyLiverLungMuscleOvaryTestisENST00000422633
Transcript ID Adipose Colon Kidney Liver Lung Muscle Ovary Testis
ENST00000422633 0.069±0.00 0.057±0.00 0.025±0.00 0.011±0.00 0.057±0.00 0.042±0.00 0.025±0.00 0.022±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000163666 Eif4a1-001 protein_coding Mus_musculus 0 1616
ENSMUST00000122226 Eif4a-ps4-001 processed_pseudogene Mus_musculus 0 1609
ENSMUST00000072982 Gm5513-201 processed_pseudogene Mus_musculus 0 1498
ENSMUST00000120460 Gm12136-001 processed_pseudogene Mus_musculus 0 1219
ENSMUST00000118589 Gm15568-001 processed_pseudogene Mus_musculus 0 1077
ENSMUST00000128519 Eif4a1-012 retained_intron Mus_musculus 0 1005
ENSMUST00000102589 Eif4a1-013 nonsense_mediated_decay Mus_musculus 0 889
ENSMUST00000121818 Gm12920-001 processed_pseudogene Mus_musculus 0 843
ENSMUST00000121086 Gm11258-001 processed_pseudogene Mus_musculus 0 797
ENSDART00000011878 eif4a1b-001 protein_coding Danio_rerio 0 756
ENSMUST00000123995 Eif4a1-002 retained_intron Mus_musculus 0 617
ENSMUST00000139299 Eif4a1-006 processed_transcript Mus_musculus 0 460
ENSMUST00000140310 Eif4a1-007 processed_transcript Mus_musculus 0 448
ENSDART00000140602 eif4a1b-002 processed_transcript Danio_rerio 0 435
ENSMUST00000142214 Eif4a1-003 processed_transcript Mus_musculus 0 414
ENSMUST00000127677 Eif4a1-008 processed_transcript Mus_musculus 0 363
ENSMUST00000142348 Eif4a1-010 processed_transcript Mus_musculus 0 327
ENSMUST00000145289 Eif4a1-004 retained_intron Mus_musculus 0 272
ENSMUST00000129295 Eif4a1-005 retained_intron Mus_musculus 0 248
ENSMUST00000140186 Eif4a1-011 processed_transcript Mus_musculus 9.94922e-44 182
ENSMUST00000133067 Eif4a1-009 processed_transcript Mus_musculus 3e-29 134

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