C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 11557
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120200 Gm11557-001 ENSMUSG00000082900 10090 + 11:99678126-99679133 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000120200
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000120200 0.073±0.04 0.048±0.00 0.024±0.01 0.006±0.00 0.386±0.55 0.053±0.00 0.036±0.01 0.040±0.01 0.020±0.01 0.043±0.00 0.062±0.01 0.132±0.00 0.060±0.07

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000058384 gapdhs-001 protein_coding Danio_rerio 0 407
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 1138
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 874
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 1118
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 1138
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 1138
ENST00000398586 GAPDHP15-001 processed_pseudogene Homo_sapiens 0 486
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 902
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 580
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 821
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 1038
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 850
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 691
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 854
ENST00000436818 GAPDHP26-001 processed_pseudogene Homo_sapiens 0 695
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 778
ENST00000443168 GAPDHP33-001 processed_pseudogene Homo_sapiens 0 523
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 628
ENST00000447061 GAPDHP25-001 processed_pseudogene Homo_sapiens 0 843
ENST00000449411 GAPDHP74-001 processed_pseudogene Homo_sapiens 0 398
ENST00000450301 GAPDHP21-001 processed_pseudogene Homo_sapiens 0 758
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 1107
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 545
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 874
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 874
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 819
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 865
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 913
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 640
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 0 296
ENST00000513369 RP11-159J3.1-001 processed_pseudogene Homo_sapiens 0 841
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 885
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 929
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 564
ENST00000515281 GAPDHP70-001 processed_pseudogene Homo_sapiens 0 761
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 833
ENST00000520713 ANKRD46-009 processed_transcript Homo_sapiens 0 734
ENST00000524319 ANKRD46-003 processed_transcript Homo_sapiens 0 734
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 523
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 1014

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