C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13932
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120873 Gm13932-001 ENSMUSG00000083915 10090 - 2:109791925-109792534 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainLiverOvaryPlacentaTestisENSMUST00000120873
Transcript ID Adrenal Bladder Brain Liver Ovary Placenta Testis
ENSMUST00000120873 0.232±0.01 0.038±0.01 0.056±0.04 0.049±0.06 0.406±0.22 0.093±0.00 0.304±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000111964 hmgb1a-201 protein_coding Danio_rerio 0 281
ENST00000326004 HMGB1-003 protein_coding Homo_sapiens 0 582
ENST00000339872 HMGB1-001 protein_coding Homo_sapiens 0 702
ENST00000341423 HMGB1-004 protein_coding Homo_sapiens 0 702
ENST00000395823 HMGB1P10-001 processed_pseudogene Homo_sapiens 0 658
ENST00000399489 HMGB1-009 protein_coding Homo_sapiens 0 582
ENST00000399494 HMGB1-011 protein_coding Homo_sapiens 0 702
ENST00000405805 HMGB1-012 protein_coding Homo_sapiens 0 702
ENST00000455362 HMGB1P4-001 processed_pseudogene Homo_sapiens 0 575
ENST00000490788 HMGB1-008 processed_transcript Homo_sapiens 0 276
ENST00000522557 HMGB1P1-001 processed_pseudogene Homo_sapiens 0 675
ENST00000558211 HMGB1P8-001 processed_pseudogene Homo_sapiens 0 233
ENST00000569046 RP11-673C5.1-001 processed_pseudogene Homo_sapiens 0 695

Loading