Transcript ID | Testis |
---|---|
ENST00000399489 | 2.900±0.00 |
Transcript Info |
||||||
Description: | high mobility group box 1 | |||||
---|---|---|---|---|---|---|
Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000399489 | HMGB1-009 | ENSG00000189403 | 9606 | - | 13:30460895-30464247 | protein_coding |
Expression Patterns
|
Conserved Regions | |||
---|---|---|---|
Region ID | Sub-Region | Region Type | Position |
CIL_0004CF | CIL_0004CF_0001 | CGP | 13:30456704-30660770 |
Gene Ontology | ||
---|---|---|
GO ID | Evidence Type | GO Description |
GO:0003677 | IEA | DNA binding |
GO:0005634 | IEA | nucleus |
Homologs | |||||
ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
ENSMUST00000110505 | Hmgb1-003 | protein_coding | Mus_musculus | 0 | 795 |
ENSMUST00000085546 | Hmgb1-001 | protein_coding | Mus_musculus | 0 | 795 |
ENSMUST00000178049 | Gm21596-201 | processed_pseudogene | Mus_musculus | 0 | 782 |
ENSMUST00000139443 | Hmgb1-006 | retained_intron | Mus_musculus | 0 | 673 |
ENSMUST00000093196 | Hmgb1-002 | protein_coding | Mus_musculus | 0 | 673 |
ENSMUST00000120421 | Gm15387-001 | processed_pseudogene | Mus_musculus | 0 | 660 |
ENSMUST00000117548 | Hmgb1-ps2-001 | processed_pseudogene | Mus_musculus | 0 | 654 |
ENSMUST00000118415 | Hmgb1-ps3-001 | processed_pseudogene | Mus_musculus | 0 | 654 |
ENSMUST00000084171 | Gm5518-201 | processed_pseudogene | Mus_musculus | 0 | 654 |
ENSMUST00000118281 | Hmgb1-ps4-001 | processed_pseudogene | Mus_musculus | 0 | 647 |
ENSMUST00000173370 | Hmgb1-ps7-001 | processed_pseudogene | Mus_musculus | 0 | 643 |
ENSMUST00000179479 | Hmgb1-ps9-201 | processed_pseudogene | Mus_musculus | 0 | 643 |
ENSMUST00000119715 | Gm5937-001 | processed_pseudogene | Mus_musculus | 0 | 636 |
ENSMUST00000179821 | RP24-388H6.4-001 | processed_pseudogene | Mus_musculus | 0 | 634 |
ENSMUST00000162030 | AC098736.2-001 | processed_pseudogene | Mus_musculus | 0 | 630 |
ENSMUST00000119503 | Hmgb1-ps6-001 | processed_pseudogene | Mus_musculus | 0 | 623 |
ENSMUST00000121058 | Hmgb1-ps5-001 | processed_pseudogene | Mus_musculus | 0 | 619 |
ENSMUST00000120637 | Gm13121-001 | processed_pseudogene | Mus_musculus | 0 | 606 |
ENSMUST00000118053 | Gm13379-001 | processed_pseudogene | Mus_musculus | 0 | 597 |
ENSMUST00000176164 | Gm3307-001 | processed_pseudogene | Mus_musculus | 0 | 595 |
ENSMUST00000119927 | Gm12331-001 | processed_pseudogene | Mus_musculus | 0 | 588 |
ENSMUST00000119350 | Hmgb1-ps1-001 | processed_pseudogene | Mus_musculus | 0 | 584 |
ENSMUST00000181542 | Hmgb1-ps8-001 | processed_pseudogene | Mus_musculus | 0 | 584 |
ENSMUST00000120873 | Gm13932-001 | processed_pseudogene | Mus_musculus | 0 | 582 |
ENSMUST00000119126 | Gm9078-001 | processed_pseudogene | Mus_musculus | 0 | 579 |
ENSMUST00000117362 | Gm12568-001 | processed_pseudogene | Mus_musculus | 0 | 579 |
ENSMUST00000179326 | Gm5473-201 | processed_pseudogene | Mus_musculus | 0 | 566 |
ENSMUST00000138553 | Hmgb1-007 | protein_coding | Mus_musculus | 0 | 555 |
ENSMUST00000180890 | Gm26585-001 | processed_pseudogene | Mus_musculus | 0 | 553 |
ENSMUST00000121589 | Gm11645-001 | processed_pseudogene | Mus_musculus | 0 | 538 |
ENSMUST00000122269 | Gm14473-001 | processed_pseudogene | Mus_musculus | 0 | 531 |
ENSMUST00000120842 | Gm8152-001 | processed_pseudogene | Mus_musculus | 0 | 529 |
ENSMUST00000120175 | Gm11830-001 | processed_pseudogene | Mus_musculus | 0 | 521 |
ENSMUST00000121009 | Gm14049-001 | processed_pseudogene | Mus_musculus | 0 | 518 |
ENSMUST00000117107 | Gm15560-001 | processed_pseudogene | Mus_musculus | 0 | 507 |
ENSMUST00000117940 | Hmgb1-rs18-001 | processed_pseudogene | Mus_musculus | 0 | 505 |
ENSMUST00000073196 | Gm10075-201 | pseudogene | Mus_musculus | 0 | 505 |
ENSMUST00000120015 | Gm6461-001 | processed_pseudogene | Mus_musculus | 0 | 501 |
ENSMUST00000118469 | Gm15778-001 | processed_pseudogene | Mus_musculus | 0 | 492 |
ENSMUST00000190177 | RP24-229N7.1-001 | processed_pseudogene | Mus_musculus | 0 | 483 |
ENSMUST00000117499 | Gm12261-001 | processed_pseudogene | Mus_musculus | 0 | 468 |
ENSMUST00000121222 | Gm5396-001 | processed_pseudogene | Mus_musculus | 0 | 468 |
ENSMUST00000119766 | Gm12118-001 | processed_pseudogene | Mus_musculus | 0 | 468 |
ENSMUST00000183926 | Gm27254-001 | processed_pseudogene | Mus_musculus | 0 | 466 |
ENSMUST00000133667 | Hmgb1-004 | retained_intron | Mus_musculus | 0 | 460 |
ENSMUST00000186576 | RP24-241N3.1-001 | processed_pseudogene | Mus_musculus | 0 | 448 |
ENSMUST00000182688 | Gm7909-001 | processed_pseudogene | Mus_musculus | 0 | 444 |
ENSMUST00000179328 | Gm8807-201 | processed_pseudogene | Mus_musculus | 0 | 435 |
ENSMUST00000120970 | Gm15750-001 | processed_pseudogene | Mus_musculus | 0 | 433 |
ENSMUST00000184467 | Gm7870-001 | processed_pseudogene | Mus_musculus | 0 | 431 |
ENSMUST00000155086 | Hmgb1-009 | retained_intron | Mus_musculus | 0 | 431 |
ENSMUST00000125605 | Hmgb1-008 | protein_coding | Mus_musculus | 0 | 424 |
ENSMUST00000120168 | Gm13902-001 | processed_pseudogene | Mus_musculus | 0 | 374 |
ENSMUST00000168653 | Gm3851-001 | processed_pseudogene | Mus_musculus | 0 | 303 |
ENSMUST00000155154 | Ppm1e-002 | processed_transcript | Mus_musculus | 0 | 303 |
ENSMUST00000116383 | Gm14448-001 | processed_pseudogene | Mus_musculus | 0 | 261 |
ENSMUST00000123645 | Hmgb1-005 | retained_intron | Mus_musculus | 0 | 246 |
ENSMUST00000189012 | RP23-338I1.1-001 | processed_pseudogene | Mus_musculus | 5.00264e-43 | 180 |
ENSMUST00000128343 | Gm3160-001 | processed_pseudogene | Mus_musculus | 1e-18 | 99 |