C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 11334
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121969 Gm11334-001 ENSMUSG00000083667 10090 + 13:23382505-23382660 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000121969
Transcript ID Testis
ENSMUST00000121969 5.649±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000273411 RPL39P5-002 processed_transcript Homo_sapiens 4e-38 161
ENST00000296277 RPL39L-002 protein_coding Homo_sapiens 2e-34 150
ENST00000361575 RPL39-001 protein_coding Homo_sapiens 8e-40 167
ENST00000423619 RP11-54O7.10-001 processed_pseudogene Homo_sapiens 3e-40 167
ENST00000424573 RPL39P3-001 processed_pseudogene Homo_sapiens 3e-40 167
ENST00000433055 RPL39L-003 protein_coding Homo_sapiens 2e-34 150
ENST00000439897 RP11-91I11.1-001 processed_pseudogene Homo_sapiens 2e-37 158
ENST00000447385 AC020550.7-001 processed_pseudogene Homo_sapiens 2e-36 154
ENST00000449384 RPL39P25-001 processed_pseudogene Homo_sapiens 1e-33 145
ENST00000455270 RPL39L-001 protein_coding Homo_sapiens 1e-34 150
ENST00000455840 RP3-481F12.1-001 processed_pseudogene Homo_sapiens 1e-18 95
ENST00000465012 RP11-178L8.1-001 processed_pseudogene Homo_sapiens 1.99993e-41 171
ENST00000465655 RPL39P28-001 processed_pseudogene Homo_sapiens 1e-29 132
ENST00000468844 RPL39-002 processed_transcript Homo_sapiens 6e-38 163
ENST00000474150 CTD-2282P23.1-001 processed_pseudogene Homo_sapiens 2e-32 141
ENST00000480211 RP11-318G8.1-001 processed_pseudogene Homo_sapiens 6e-37 156
ENST00000495111 RP11-1094M14.1-001 processed_pseudogene Homo_sapiens 6e-32 139
ENST00000512505 RPL39P5-001 transcribed_processed_pseudogene Homo_sapiens 8e-36 152
ENST00000543629 LMNTD1-011 protein_coding Homo_sapiens 6e-28 128

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