C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S19
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000130335 Rps19-010 ENSMUSG00000040952 10090 + 7:24888190-24889804 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaENSMUST00000130335
Transcript ID Ovary Placenta
ENSMUST00000130335 152.378±0.00 143.296±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003WP CIL_0003WP_0002 CGP 7:24870057-24889806
CIL_0003W3 CIL_0003W3_0002 CGP 7:24884371-24902197

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000221975 RPS19-005 protein_coding Homo_sapiens 0 442
ENST00000405355 RP11-346C16.4-001 processed_pseudogene Homo_sapiens 0 298
ENST00000415286 RPS19P1-001 processed_pseudogene Homo_sapiens 0 344
ENST00000455650 RP11-445N18.3-001 processed_pseudogene Homo_sapiens 0 261
ENST00000457967 RP11-389O22.4-001 processed_pseudogene Homo_sapiens 0 246
ENST00000477321 RP11-289K10.1-001 processed_pseudogene Homo_sapiens 0 303
ENST00000480487 RPS19P3-001 processed_pseudogene Homo_sapiens 0 327
ENST00000593863 RPS19-006 protein_coding Homo_sapiens 0 442
ENST00000598399 RPS19-008 nonsense_mediated_decay Homo_sapiens 0 237
ENST00000598742 RPS19-001 protein_coding Homo_sapiens 0 442

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