C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L30
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140527 Rpl30-004 ENSMUSG00000058600 10090 - 15:34442521-34443259 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000140527
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000140527 48.453±12.71 721.270±157.15 190.281±97.01 31.021±9.17 41.666±8.34 48.418±14.40 48.681±11.17 226.757±256.76 53.401±15.37 135.797±279.76 540.986±116.62 62.148±4.98

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001KP CIL_0001KP_0002 CGP 15:34440505-34473892

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000052082 rpl30-001 protein_coding Danio_rerio 5e-32 141
ENST00000287038 RPL30-001 protein_coding Homo_sapiens 0 388
ENST00000396070 RPL30-009 protein_coding Homo_sapiens 0 348
ENST00000418873 RPL30P13-001 processed_pseudogene Homo_sapiens 9e-39 163
ENST00000419341 RPL30P16-001 processed_pseudogene Homo_sapiens 0.00000004 62
ENST00000429309 RPL30P4-001 processed_pseudogene Homo_sapiens 0 189
ENST00000457129 RPL30P15-001 processed_pseudogene Homo_sapiens 2e-35 152
ENST00000482744 RPL30P14-001 processed_pseudogene Homo_sapiens 0 202
ENST00000517489 RPL30-004 retained_intron Homo_sapiens 0 220
ENST00000518164 RPL30-002 processed_transcript Homo_sapiens 0 353
ENST00000518850 RPL30-010 nonsense_mediated_decay Homo_sapiens 0 359
ENST00000520998 RPL30-006 retained_intron Homo_sapiens 0 359
ENST00000521112 RPL30-005 retained_intron Homo_sapiens 0 226
ENST00000521291 RPL30-007 protein_coding Homo_sapiens 0 302
ENST00000521726 RPL30-003 protein_coding Homo_sapiens 0 302
ENST00000523172 RPL30-008 protein_coding Homo_sapiens 1e-31 139

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