C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 2976
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000160362 Gm2976-001 ENSMUSG00000090067 10090 - 9:22479934-22480446 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastKidneyLungPlacentaTestisENSMUST00000160362
Transcript ID Adipose Bladder Brain Breast Kidney Lung Placenta Testis
ENSMUST00000160362 0.084±0.00 0.104±0.00 0.063±0.00 0.290±0.00 0.082±0.00 0.199±0.10 0.119±0.12 0.346±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003FH CIL_0003FH_0002 CGP 9:22475715-23485202

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000393397 AC005042.2-001 processed_pseudogene Homo_sapiens 0 346
ENST00000396414 RP11-242C24.2-001 processed_pseudogene Homo_sapiens 0 322
ENST00000441433 RPL7AP38-001 processed_pseudogene Homo_sapiens 0 350
ENST00000473054 RP11-204K16.1-001 processed_pseudogene Homo_sapiens 0 438
ENST00000476420 RPL7AP56-001 processed_pseudogene Homo_sapiens 4.00001e-41 172
ENST00000477943 RPL7AP6-001 processed_pseudogene Homo_sapiens 0 508
ENST00000483820 RPL7AP4-001 processed_pseudogene Homo_sapiens 0 305
ENST00000496515 RPL7AP2-001 processed_pseudogene Homo_sapiens 0 355
ENST00000541658 RPL7AP3-001 processed_pseudogene Homo_sapiens 3e-40 169

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