C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L7a pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000496515 RPL7AP2-001 ENSG00000241984 9606 + 14:39156742-39157852 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000496515
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000496515 0.088±0.00 0.117±0.00 0.247±0.00 0.205±0.00 0.098±0.00 0.068±0.00 0.108±0.00 0.096±0.00 0.023±0.00 0.063±0.02 0.077±0.00 0.099±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VX CIL_0003VX_0001 CGP 14:39114223-39170532
CIL_0003VY CIL_0003VY_0001 CGP 14:39147811-39183218

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000090170 Rpl7a-ps3-201 protein_coding Mus_musculus 0 562
ENSMUST00000085365 Gm16477-001 processed_pseudogene Mus_musculus 0 555
ENSMUST00000118791 Rpl7a-ps11-001 processed_pseudogene Mus_musculus 0 549
ENSMUST00000190511 RP23-58N8.1-001 processed_pseudogene Mus_musculus 0 549
ENSMUST00000102898 Rpl7a-001 protein_coding Mus_musculus 0 549
ENSMUST00000183380 Gm17828-001 processed_pseudogene Mus_musculus 0 540
ENSMUST00000071172 RP23-58N8.4-001 processed_pseudogene Mus_musculus 0 538
ENSMUST00000190579 Rpl7a-ps10-001 processed_pseudogene Mus_musculus 0 538
ENSMUST00000119745 Gm13864-001 processed_pseudogene Mus_musculus 0 532
ENSMUST00000120676 Gm12712-001 processed_pseudogene Mus_musculus 0 532
ENSMUST00000191231 RP24-217I2.2-001 processed_pseudogene Mus_musculus 0 532
ENSMUST00000104977 Gm4877-201 protein_coding Mus_musculus 0 529
ENSMUST00000094754 Rpl7a-ps8-201 protein_coding Mus_musculus 0 527
ENSMUST00000096427 Gm17415-001 processed_pseudogene Mus_musculus 0 525
ENSMUST00000117240 Gm11989-001 processed_pseudogene Mus_musculus 0 521
ENSMUST00000071565 Gm4978-201 protein_coding Mus_musculus 0 520
ENSMUST00000121575 Gm12630-001 processed_pseudogene Mus_musculus 0 518
ENSMUST00000161633 Gm5766-001 transcribed_processed_pseudogene Mus_musculus 0 514
ENSMUST00000160520 Gm5766-002 processed_transcript Mus_musculus 0 514
ENSMUST00000189720 RP23-321G17.2-001 processed_pseudogene Mus_musculus 0 512
ENSMUST00000118638 Gm13039-001 processed_pseudogene Mus_musculus 0 510
ENSMUST00000162120 Gm7418-001 processed_pseudogene Mus_musculus 0 510
ENSMUST00000095218 Rpl7a-ps5-201 protein_coding Mus_musculus 0 510
ENSMUST00000119629 Gm11979-001 processed_pseudogene Mus_musculus 0 496
ENSMUST00000171395 Gm8425-001 processed_pseudogene Mus_musculus 0 488
ENSMUST00000121823 Gm5257-001 processed_pseudogene Mus_musculus 0 479
ENSMUST00000171235 Gm5459-001 processed_pseudogene Mus_musculus 0 455
ENSMUST00000118973 Gm15617-001 processed_pseudogene Mus_musculus 0 451
ENSMUST00000118766 Gm16198-001 processed_pseudogene Mus_musculus 0 449
ENSMUST00000185009 Gm14214-001 translated_processed_pseudogene Mus_musculus 0 448
ENSMUST00000184654 Gm14214-002 protein_coding Mus_musculus 0 448
ENSMUST00000136269 Rpl7a-002 processed_transcript Mus_musculus 0 435
ENSMUST00000116081 Gm14853-001 processed_pseudogene Mus_musculus 0 433
ENSMUST00000122273 Gm12269-001 processed_pseudogene Mus_musculus 0 431
ENSMUST00000165944 RP24-170M24.1-001 processed_pseudogene Mus_musculus 0 429
ENSMUST00000117439 Gm12385-001 processed_pseudogene Mus_musculus 0 424
ENSMUST00000137376 Rpl7a-004 processed_transcript Mus_musculus 0 422
ENSMUST00000118838 Gm11362-001 processed_pseudogene Mus_musculus 0 405
ENSMUST00000129972 Gm16304-001 processed_pseudogene Mus_musculus 0 392
ENSMUST00000120504 Gm12124-001 processed_pseudogene Mus_musculus 0 390
ENSMUST00000188170 RP23-248N10.1-001 processed_pseudogene Mus_musculus 0 388
ENSMUST00000120981 Gm12593-001 processed_pseudogene Mus_musculus 0 374
ENSMUST00000118615 Gm13183-001 processed_pseudogene Mus_musculus 0 355
ENSMUST00000160362 Gm2976-001 processed_pseudogene Mus_musculus 0 355
ENSMUST00000117118 Rpl7a-ps9-001 processed_pseudogene Mus_musculus 0 339
ENSMUST00000121538 Gm14156-001 processed_pseudogene Mus_musculus 0 333
ENSMUST00000143678 Rpl7a-003 processed_transcript Mus_musculus 0 279
ENSMUST00000172650 Gm7393-001 processed_pseudogene Mus_musculus 0 228
ENSMUST00000119680 Gm15702-001 processed_pseudogene Mus_musculus 2e-34 150
ENSMUST00000118404 Gm12713-001 processed_pseudogene Mus_musculus 4e-16 90
ENSMUST00000129673 Rpl7a-005 processed_transcript Mus_musculus 0.0000000000002 81

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