C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L7a pseudogene 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000483820 RPL7AP4-001 ENSG00000213641 9606 + 14:55543401-55544169 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLungMuscleENST00000483820
Transcript ID Adipose Adrenal Breast Colon Kidney Lung Muscle
ENST00000483820 0.048±0.00 0.026±0.00 0.027±0.00 0.050±0.00 0.054±0.00 0.262±0.00 0.068±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000085365 Gm16477-001 processed_pseudogene Mus_musculus 0 651
ENSMUST00000118791 Rpl7a-ps11-001 processed_pseudogene Mus_musculus 0 634
ENSMUST00000190511 RP23-58N8.1-001 processed_pseudogene Mus_musculus 0 634
ENSMUST00000102898 Rpl7a-001 protein_coding Mus_musculus 0 628
ENSMUST00000120676 Gm12712-001 processed_pseudogene Mus_musculus 0 623
ENSMUST00000183380 Gm17828-001 processed_pseudogene Mus_musculus 0 621
ENSMUST00000090170 Rpl7a-ps3-201 protein_coding Mus_musculus 0 621
ENSMUST00000094754 Rpl7a-ps8-201 protein_coding Mus_musculus 0 614
ENSMUST00000095218 Rpl7a-ps5-201 protein_coding Mus_musculus 0 612
ENSMUST00000190579 Rpl7a-ps10-001 processed_pseudogene Mus_musculus 0 606
ENSMUST00000096427 Gm17415-001 processed_pseudogene Mus_musculus 0 595
ENSMUST00000071172 RP23-58N8.4-001 processed_pseudogene Mus_musculus 0 592
ENSMUST00000191231 RP24-217I2.2-001 processed_pseudogene Mus_musculus 0 590
ENSMUST00000161633 Gm5766-001 transcribed_processed_pseudogene Mus_musculus 0 588
ENSMUST00000160520 Gm5766-002 processed_transcript Mus_musculus 0 588
ENSMUST00000071565 Gm4978-201 protein_coding Mus_musculus 0 573
ENSMUST00000117398 Gm8250-001 processed_pseudogene Mus_musculus 0 566
ENSMUST00000121575 Gm12630-001 processed_pseudogene Mus_musculus 0 566
ENSMUST00000119745 Gm13864-001 processed_pseudogene Mus_musculus 0 564
ENSMUST00000119589 Gm16071-001 processed_pseudogene Mus_musculus 0 564
ENSMUST00000118638 Gm13039-001 processed_pseudogene Mus_musculus 0 549
ENSMUST00000162120 Gm7418-001 processed_pseudogene Mus_musculus 0 545
ENSMUST00000121823 Gm5257-001 processed_pseudogene Mus_musculus 0 540
ENSMUST00000184700 Gm7863-001 processed_pseudogene Mus_musculus 0 540
ENSMUST00000185009 Gm14214-001 translated_processed_pseudogene Mus_musculus 0 529
ENSMUST00000139800 Gm5353-001 processed_pseudogene Mus_musculus 0 521
ENSMUST00000185999 RP23-16N14.6-001 processed_pseudogene Mus_musculus 0 518
ENSMUST00000119629 Gm11979-001 processed_pseudogene Mus_musculus 0 514
ENSMUST00000165944 RP24-170M24.1-001 processed_pseudogene Mus_musculus 0 507
ENSMUST00000136269 Rpl7a-002 processed_transcript Mus_musculus 0 503
ENSMUST00000117240 Gm11989-001 processed_pseudogene Mus_musculus 0 501
ENSMUST00000184654 Gm14214-002 protein_coding Mus_musculus 0 496
ENSMUST00000118615 Gm13183-001 processed_pseudogene Mus_musculus 0 479
ENSMUST00000118291 Gm16166-001 processed_pseudogene Mus_musculus 0 475
ENSMUST00000116081 Gm14853-001 processed_pseudogene Mus_musculus 0 466
ENSMUST00000171395 Gm8425-001 processed_pseudogene Mus_musculus 0 457
ENSMUST00000120236 Gm14141-001 processed_pseudogene Mus_musculus 0 457
ENSMUST00000137376 Rpl7a-004 processed_transcript Mus_musculus 0 446
ENSMUST00000118838 Gm11362-001 processed_pseudogene Mus_musculus 0 422
ENSMUST00000122273 Gm12269-001 processed_pseudogene Mus_musculus 0 418
ENSMUST00000117118 Rpl7a-ps9-001 processed_pseudogene Mus_musculus 0 416
ENSMUST00000129972 Gm16304-001 processed_pseudogene Mus_musculus 0 412
ENSMUST00000118973 Gm15617-001 processed_pseudogene Mus_musculus 0 398
ENSMUST00000188170 RP23-248N10.1-001 processed_pseudogene Mus_musculus 0 388
ENSMUST00000143678 Rpl7a-003 processed_transcript Mus_musculus 0 359
ENSMUST00000120981 Gm12593-001 processed_pseudogene Mus_musculus 0 353
ENSMUST00000121538 Gm14156-001 processed_pseudogene Mus_musculus 0 329
ENSMUST00000160362 Gm2976-001 processed_pseudogene Mus_musculus 0 305
ENSMUST00000172650 Gm7393-001 processed_pseudogene Mus_musculus 0 302
ENSMUST00000119680 Gm15702-001 processed_pseudogene Mus_musculus 8e-38 161
ENSMUST00000166414 Gm17097-001 processed_pseudogene Mus_musculus 1e-25 121
ENSMUST00000129673 Rpl7a-005 processed_transcript Mus_musculus 0.000000000000005 86

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