C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 7393
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172650 Gm7393-001 ENSMUSG00000092577 10090 + 17:14941965-14942703 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000172650
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000172650 0.172±0.07 0.281±0.23 0.205±0.05 0.167±0.07 0.237±0.11 0.239±0.20 0.154±0.06 0.224±0.15 0.119±0.08 0.282±0.21 0.094±0.00 0.501±0.30 0.137±0.10 1.512±0.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004W2 CIL_0004W2_0002 CGP 17:14829331-14959570

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000393397 AC005042.2-001 processed_pseudogene Homo_sapiens 0 267
ENST00000396414 RP11-242C24.2-001 processed_pseudogene Homo_sapiens 0 244
ENST00000441433 RPL7AP38-001 processed_pseudogene Homo_sapiens 0 228
ENST00000473054 RP11-204K16.1-001 processed_pseudogene Homo_sapiens 0 335
ENST00000473913 RP11-463O9.1-001 processed_pseudogene Homo_sapiens 0 342
ENST00000476420 RPL7AP56-001 processed_pseudogene Homo_sapiens 5e-25 119
ENST00000483820 RPL7AP4-001 processed_pseudogene Homo_sapiens 0 302
ENST00000496515 RPL7AP2-001 processed_pseudogene Homo_sapiens 0 228
ENST00000541658 RPL7AP3-001 processed_pseudogene Homo_sapiens 9.94922e-44 180

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