C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | ribosomal protein L27A | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000174303  |
Rpl27a-006 |
ENSMUSG00000046364 |
10090 | + |
7:109519270-109519938  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008Q2 | CIL_0008Q2_0002 | VISTA | 7:109258267-109860076 |
| CIL_00049H | CIL_00049H_0002 | CGP | 7:109449006-109522367 |
| CIL_00049E | CIL_00049E_0002 | CGP | 7:109519147-109617147 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000314138
|
RPL27A-001 | protein_coding | Homo_sapiens | 5e-27 | 128 |
|
ENST00000469428
|
RPL27AP5-001 | processed_pseudogene | Homo_sapiens | 0.00000000000001 | 84 |
|
ENST00000492974
|
RP11-475C16.1-001 | processed_pseudogene | Homo_sapiens | 2e-26 | 122 |
|
ENST00000524496
|
RPL27A-007 | protein_coding | Homo_sapiens | 3e-21 | 106 |
|
ENST00000525981
|
RPL27A-010 | protein_coding | Homo_sapiens | 2e-20 | 102 |
|
ENST00000526562
|
RPL27A-009 | protein_coding | Homo_sapiens | 5e-28 | 128 |
|
ENST00000529227
|
RPL27A-002 | retained_intron | Homo_sapiens | 2e-23 | 113 |
|
ENST00000530022
|
RPL27A-008 | protein_coding | Homo_sapiens | 4e-31 | 139 |
|
ENST00000530585
|
RPL27A-003 | retained_intron | Homo_sapiens | 6e-28 | 128 |
|
ENST00000531978
|
RPL27A-004 | protein_coding | Homo_sapiens | 9e-28 | 128 |
|
ENST00000532359
|
RPL27A-006 | protein_coding | Homo_sapiens | 4e-28 | 128 |
|
ENST00000534599
|
RPL27A-005 | nonsense_mediated_decay | Homo_sapiens | 3e-21 | 106 |
