C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S19, pseudogene 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000180714 Rps19-ps8-001 ENSMUSG00000096920 10090 - 5:108055495-108055916 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastPlacentaENSMUST00000180714
Transcript ID Brain Breast Placenta
ENSMUST00000180714 0.135±0.00 0.382±0.20 0.240±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005ZP CIL_0005ZP_0002 CGP 5:107908053-108109004

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000221975 RPS19-005 protein_coding Homo_sapiens 0 457
ENST00000405355 RP11-346C16.4-001 processed_pseudogene Homo_sapiens 0 350
ENST00000415286 RPS19P1-001 processed_pseudogene Homo_sapiens 0 411
ENST00000455650 RP11-445N18.3-001 processed_pseudogene Homo_sapiens 0 316
ENST00000457967 RP11-389O22.4-001 processed_pseudogene Homo_sapiens 0 281
ENST00000477321 RP11-289K10.1-001 processed_pseudogene Homo_sapiens 0 333
ENST00000480487 RPS19P3-001 processed_pseudogene Homo_sapiens 0 431
ENST00000593863 RPS19-006 protein_coding Homo_sapiens 0 473
ENST00000598261 RPS19-007 protein_coding Homo_sapiens 0 195
ENST00000598399 RPS19-008 nonsense_mediated_decay Homo_sapiens 0 195
ENST00000598466 RPS19-004 retained_intron Homo_sapiens 0 195
ENST00000598742 RPS19-001 protein_coding Homo_sapiens 0 473
ENST00000600467 RPS19-002 protein_coding Homo_sapiens 0 195
ENST00000601492 RPS19-003 protein_coding Homo_sapiens 0 195

Loading