C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 6283
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182369 Gm6283-001 ENSMUSG00000098057 10090 + 10:127313149-127314148 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000182369
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000182369 0.086±0.02 0.204±0.02 0.067±0.01 0.049±0.01 0.183±0.09 0.098±0.04 0.069±0.03 0.058±0.04 0.082±0.07 0.083±0.03 0.058±0.00 0.140±0.09 0.046±0.00 0.055±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00039K CIL_00039K_0002 CGP 10:127296221-127329943

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000058384 gapdhs-001 protein_coding Danio_rerio 0 320
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 992
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 821
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 972
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 992
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 992
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 761
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 728
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 833
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 702
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 736
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 893
ENST00000429913 GAPDHP29-001 processed_pseudogene Homo_sapiens 0 549
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 721
ENST00000434621 GAPDHP68-001 processed_pseudogene Homo_sapiens 0 761
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 686
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 580
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 536
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 555
ENST00000445880 RP1-52D1.1-001 processed_pseudogene Homo_sapiens 9e-24 111
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 917
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 516
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 821
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 821
ENST00000481866 GAPDHP39-001 processed_pseudogene Homo_sapiens 0 553
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 693
ENST00000505218 GAPDHP40-001 processed_pseudogene Homo_sapiens 0 713
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 811
ENST00000511530 GAPDHP71-001 processed_pseudogene Homo_sapiens 0 763
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 778
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 412
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 915

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