C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 6967
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182599 Gm6967-001 ENSMUSG00000097937 10090 - 19:46674273-46675279 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000182599
Transcript ID Adipose Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000182599 0.105±0.02 0.027±0.01 0.111±0.00 0.028±0.00 0.056±0.03 0.261±0.17 0.055±0.02 0.066±0.00 0.080±0.04 0.799±0.88 0.066±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008MQ CIL_0008MQ_0002 VISTA 19:46318498-46919738
CIL_0001HW CIL_0001HW_0003 CGP 19:46667165-46703382

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 1040
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 939
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 1022
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 1040
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 1040
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 793
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 776
ENST00000422905 GAPDHP67-001 processed_pseudogene Homo_sapiens 0 259
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 496
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 769
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 706
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 976
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 833
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 673
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 701
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 521
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 453
ENST00000450301 GAPDHP21-001 processed_pseudogene Homo_sapiens 0 704
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 972
ENST00000455134 GAPDHP28-001 processed_pseudogene Homo_sapiens 0 701
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 516
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 817
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 817
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 715
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 785
ENST00000505218 GAPDHP40-001 processed_pseudogene Homo_sapiens 0 761
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 821
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 584
ENST00000511530 GAPDHP71-001 processed_pseudogene Homo_sapiens 0 761
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 0 399
ENST00000513369 RP11-159J3.1-001 processed_pseudogene Homo_sapiens 0 754
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 798
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 822
ENST00000515281 GAPDHP70-001 processed_pseudogene Homo_sapiens 0 628
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 745
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 941

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