C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 8100
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182906 Gm8100-001 ENSMUSG00000098056 10090 + 8:28185840-28186827 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonKidneyLiverMuscleOvaryPlacentaENSMUST00000182906
Transcript ID Adipose Bladder Brain Breast Colon Kidney Liver Muscle Ovary Placenta
ENSMUST00000182906 0.054±0.02 0.013±0.00 0.142±0.00 0.057±0.03 0.060±0.00 0.031±0.00 0.010±0.00 0.060±0.00 0.091±0.00 0.050±0.04

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000058384 gapdhs-001 protein_coding Danio_rerio 0 285
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 959
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 754
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 939
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 959
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 959
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 795
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 719
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 795
ENST00000422905 GAPDHP67-001 processed_pseudogene Homo_sapiens 0 254
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 680
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 870
ENST00000434621 GAPDHP68-001 processed_pseudogene Homo_sapiens 0 719
ENST00000436626 GAPDHP48-001 processed_pseudogene Homo_sapiens 0 453
ENST00000436818 GAPDHP26-001 processed_pseudogene Homo_sapiens 0 555
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 643
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 525
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 486
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 582
ENST00000445880 RP1-52D1.1-001 processed_pseudogene Homo_sapiens 9e-29 128
ENST00000450301 GAPDHP21-001 processed_pseudogene Homo_sapiens 0 606
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 905
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 466
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 754
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 754
ENST00000481866 GAPDHP39-001 processed_pseudogene Homo_sapiens 0 499
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 671
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 750
ENST00000511530 GAPDHP71-001 processed_pseudogene Homo_sapiens 0 730
ENST00000513369 RP11-159J3.1-001 processed_pseudogene Homo_sapiens 0 717
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 723
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 448
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 411
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 874

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