C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5345
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000183076 Gm5345-001 ENSMUSG00000098050 10090 - 8:40853828-40855027 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000183076
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000183076 0.293±0.05 0.389±0.18 0.343±0.13 0.061±0.00 0.193±0.14 0.086±0.04 1.635±0.61 0.345±0.17 0.685±0.32 0.259±0.30 0.132±0.04

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 996
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 773
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 996
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 996
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 996
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 789
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 745
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 833
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 769
ENST00000422905 GAPDHP67-001 processed_pseudogene Homo_sapiens 0 261
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 521
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 743
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 682
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 905
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 774
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 553
ENST00000436626 GAPDHP48-001 processed_pseudogene Homo_sapiens 0 479
ENST00000436818 GAPDHP26-001 processed_pseudogene Homo_sapiens 0 601
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 686
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 520
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 556
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 540
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 931
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 497
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 773
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 773
ENST00000481866 GAPDHP39-001 processed_pseudogene Homo_sapiens 0 529
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 706
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 749
ENST00000505218 GAPDHP40-001 processed_pseudogene Homo_sapiens 0 752
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 859
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 580
ENST00000511530 GAPDHP71-001 processed_pseudogene Homo_sapiens 0 800
ENST00000512110 AC007016.3-001 processed_pseudogene Homo_sapiens 0 255
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 0 276
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 817
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 763
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 518
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 717
ENST00000520713 ANKRD46-009 processed_transcript Homo_sapiens 0 645
ENST00000524319 ANKRD46-003 processed_transcript Homo_sapiens 0 645
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 481
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 915

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