Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	heterogeneous nuclear ribonucleoprotein A1 pseudogene 6
ENST00000394002	HNRNPA1P6-001	ENSG00000229887	9606	-	1:58048175-58049291	unprocessed_pseudogene

Expression Patterns

Transcript ID	Adipose	Adrenal	Brain	Heart	Kidney	Liver	Lung	Muscle
ENST00000394002	0.055±0.00	0.072±0.00	0.030±0.00	0.027±0.00	0.029±0.00	0.079±0.00	0.028±0.00	0.038±0.00

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_00005G	CIL_00005G_0002	CGP	1:56929210-58546734
CIL_00005F	CIL_00005F_0002	CGP	1:56994778-58546802

Gene Ontology
GO ID	Evidence Type	GO Description
No GO terms available.

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENSMUST00000087351	Hnrnpa1-202	protein_coding	Mus_musculus	0	1118
ENSMUST00000168019	Gm10052-001	processed_pseudogene	Mus_musculus	0	1116
ENSMUST00000117081	Gm5643-001	processed_pseudogene	Mus_musculus	0	1066
ENSMUST00000022493	Gm5803-001	processed_pseudogene	Mus_musculus	0	1029
ENSMUST00000181363	Gm8652-001	processed_pseudogene	Mus_musculus	0	1024
ENSMUST00000129154	Hnrnpa1l2-ps-001	processed_pseudogene	Mus_musculus	0	1020
ENSMUST00000040649	AC165425.1-201	pseudogene	Mus_musculus	0	887
ENSMUST00000050143	Gm7729-001	unprocessed_pseudogene	Mus_musculus	0	874
ENSMUST00000036004	Hnrnpa1-201	protein_coding	Mus_musculus	0	874
ENSMUST00000118970	Gm16216-001	processed_pseudogene	Mus_musculus	0	845
ENSMUST00000184038	Gm5269-001	translated_processed_pseudogene	Mus_musculus	0	725
ENSMUST00000178732	RP24-383H12.1-001	processed_pseudogene	Mus_musculus	0	684
ENSMUST00000119387	Gm12458-001	processed_pseudogene	Mus_musculus	0	427
ENSMUST00000122005	Gm12382-001	processed_pseudogene	Mus_musculus	0	405
ENSMUST00000183590	Gm5269-002	protein_coding	Mus_musculus	2e-30	137

Loading