C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5269
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000183590 Gm5269-002 ENSMUSG00000098549 10090 - 1:45889941-45890078 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENSMUST00000183590
Transcript ID Ovary
ENSMUST00000183590 6.890±2.89

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330752 HNRNPA1-023 protein_coding Homo_sapiens 4e-38 163
ENST00000340913 HNRNPA1-002 protein_coding Homo_sapiens 5e-38 163
ENST00000394002 HNRNPA1P6-001 unprocessed_pseudogene Homo_sapiens 2e-30 137
ENST00000396326 HNRNPA1P32-001 processed_pseudogene Homo_sapiens 0.000000000004 77
ENST00000411674 HNRNPA1P64-001 processed_pseudogene Homo_sapiens 6e-35 152
ENST00000411857 HNRNPA1P54-001 processed_pseudogene Homo_sapiens 1e-21 111
ENST00000412087 HNRNPA1P27-001 processed_pseudogene Homo_sapiens 5e-31 139
ENST00000424481 HNRNPA1P28-001 processed_pseudogene Homo_sapiens 3e-33 147
ENST00000426371 HNRNPA1P40-001 processed_pseudogene Homo_sapiens 4e-33 147
ENST00000436090 HNRNPA1P8-001 processed_pseudogene Homo_sapiens 1e-36 158
ENST00000437295 HNRNPA1P22-001 processed_pseudogene Homo_sapiens 6e-30 135
ENST00000444945 HNRNPA1P10-001 processed_pseudogene Homo_sapiens 1e-36 158
ENST00000452488 HNRNPA1P57-001 transcribed_processed_pseudogene Homo_sapiens 1e-32 145
ENST00000452680 HNRNPA1P43-001 processed_pseudogene Homo_sapiens 3e-28 130
ENST00000457695 HNRNPA1P26-001 processed_pseudogene Homo_sapiens 5e-31 139
ENST00000484852 HNRNPA1P20-001 processed_pseudogene Homo_sapiens 2e-20 104
ENST00000491091 HNRNPA1P23-001 processed_pseudogene Homo_sapiens 3e-19 100
ENST00000509706 HNRNPA1P4-001 processed_pseudogene Homo_sapiens 5e-35 152
ENST00000510646 HNRNPA1P13-001 processed_pseudogene Homo_sapiens 2e-35 154
ENST00000515379 HNRNPA1P12-001 processed_pseudogene Homo_sapiens 5e-31 139
ENST00000521273 HNRNPA1P7-001 processed_pseudogene Homo_sapiens 3e-38 163
ENST00000529475 HNRNPA1P76-001 processed_pseudogene Homo_sapiens 0.00000002 64
ENST00000546500 HNRNPA1-001 protein_coding Homo_sapiens 1e-37 163
ENST00000546565 HNRNPA1P50-001 processed_pseudogene Homo_sapiens 3e-33 147
ENST00000547276 HNRNPA1-012 protein_coding Homo_sapiens 4e-38 163
ENST00000547566 HNRNPA1-006 nonsense_mediated_decay Homo_sapiens 4e-38 163
ENST00000547870 HNRNPA1-016 retained_intron Homo_sapiens 3e-38 163
ENST00000548688 HNRNPA1-013 protein_coding Homo_sapiens 2e-38 163
ENST00000550482 HNRNPA1-018 protein_coding Homo_sapiens 2e-38 163
ENST00000551702 HNRNPA1-019 protein_coding Homo_sapiens 1e-38 163
ENST00000560782 HNRNPA1P74-001 processed_pseudogene Homo_sapiens 2e-24 117
ENST00000560893 HNRNPA1P45-001 processed_pseudogene Homo_sapiens 2e-30 137
ENST00000562726 HNRNPA1P48-002 processed_transcript Homo_sapiens 8e-40 169
ENST00000565308 HNRNPA1P48-001 transcribed_processed_pseudogene Homo_sapiens 6e-40 169
ENST00000570662 SRR-009 protein_coding Homo_sapiens 2e-33 147
ENST00000575692 HNRNPA1P16-001 processed_pseudogene Homo_sapiens 3e-33 147
ENST00000599047 HNRNPA1P52-001 processed_pseudogene Homo_sapiens 2e-29 134

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