C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | ribosomal protein L13 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000399461  |
RPL13-003 |
ENSG00000167526 |
9606 | + |
16:89560904-89563066  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008HA | CIL_0008HA_0001 | VISTA | 16:89018329-89621235 |
| CIL_000331 | CIL_000331_0001 | CGP | 16:89490917-89566828 |
| CIL_0006AP | CIL_0006AP_0002 | CGP | 16:89560657-89597246 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000120234
|
Gm12918-001 | processed_pseudogene | Mus_musculus | 0 | 584 |
|
ENSMUST00000000756
|
Rpl13-001 | protein_coding | Mus_musculus | 0 | 584 |
|
ENSMUST00000121821
|
Gm15710-001 | processed_pseudogene | Mus_musculus | 0 | 579 |
|
ENSMUST00000079761
|
Gm10071-201 | processed_pseudogene | Mus_musculus | 0 | 568 |
|
ENSMUST00000121801
|
Rpl13-ps1-001 | processed_pseudogene | Mus_musculus | 0 | 518 |
|
ENSMUST00000104990
|
Gm7290-001 | processed_pseudogene | Mus_musculus | 0 | 479 |
|
ENSMUST00000079960
|
Rpl13-ps3-201 | protein_coding | Mus_musculus | 0 | 477 |
|
ENSMUST00000132275
|
Rpl13-004 | retained_intron | Mus_musculus | 0 | 444 |
|
ENSMUST00000120713
|
Gm14585-001 | processed_pseudogene | Mus_musculus | 0 | 399 |
|
ENSMUST00000152444
|
Rpl13-003 | retained_intron | Mus_musculus | 0 | 375 |
|
ENSMUST00000121199
|
Gm12466-001 | processed_pseudogene | Mus_musculus | 0 | 353 |
|
ENSMUST00000117813
|
Rpl13-ps5-001 | processed_pseudogene | Mus_musculus | 0 | 346 |
|
ENSMUST00000119124
|
Gm15131-001 | processed_pseudogene | Mus_musculus | 0 | 342 |
|
ENSMUST00000129311
|
Rpl13-002 | retained_intron | Mus_musculus | 0 | 305 |
|
ENSMUST00000119734
|
Gm12011-001 | processed_pseudogene | Mus_musculus | 0 | 250 |
