Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 37
ENST00000403105	NPM1P37-001	ENSG00000219085	9606	-	6:69705287-69706160	processed_pseudogene

Expression Patterns

Transcript ID	Adipose	Adrenal	Bladder	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENST00000403105	0.058±0.00	0.228±0.00	0.553±0.00	0.335±0.06	0.462±0.00	0.421±0.31	0.240±0.21	0.130±0.06	0.702±0.69	0.820±0.81	0.064±0.00	0.331±0.36	0.124±0.00	0.136±0.05

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_00061Z	CIL_00061Z_0002	CGP	6:68635367-69797111

Gene Ontology
GO ID	Evidence Type	GO Description
No GO terms available.

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENSMUST00000075641	Npm1-001	protein_coding	Mus_musculus	0	1003
ENSMUST00000164523	Gm5611-201	protein_coding	Mus_musculus	0	859
ENSMUST00000109354	Npm1-002	protein_coding	Mus_musculus	0	828
ENSMUST00000101375	Npm1-003	protein_coding	Mus_musculus	0	826
ENSMUST00000118871	Gm15484-001	processed_pseudogene	Mus_musculus	0	791
ENSMUST00000172394	Gm17060-001	processed_pseudogene	Mus_musculus	0	719
ENSMUST00000120677	Gm12583-001	processed_pseudogene	Mus_musculus	0	719
ENSMUST00000168993	Gm7289-001	processed_pseudogene	Mus_musculus	0	612
ENSMUST00000093201	Npm1-006	protein_coding	Mus_musculus	0	586
ENSMUST00000118047	Gm14681-001	processed_pseudogene	Mus_musculus	0	527
ENSMUST00000121029	Gm14776-001	processed_pseudogene	Mus_musculus	0	405
ENSMUST00000146759	Npm1-005	processed_transcript	Mus_musculus	0	261
ENSMUST00000117205	Gm13423-001	processed_pseudogene	Mus_musculus	0	254
ENSMUST00000141881	Npm1-004	processed_transcript	Mus_musculus	8.99634e-43	178

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