C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein A1 pseudogene 37
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000404243 HNRNPA1P37-001 ENSG00000218574 9606 - 6:5609227-5610195 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000404243
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000404243 0.014±0.00 0.101±0.00 0.049±0.02 0.130±0.09 0.039±0.00 0.205±0.18 0.232±0.00 0.200±0.13 0.534±0.00 0.041±0.02 0.020±0.00 0.039±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00005I CIL_00005I_0001 CGP 6:5102593-5771580
CIL_00005H CIL_00005H_0001 CGP 6:5261044-6007605

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000087351 Hnrnpa1-202 protein_coding Mus_musculus 0 1094
ENSMUST00000168019 Gm10052-001 processed_pseudogene Mus_musculus 0 1092
ENSMUST00000117081 Gm5643-001 processed_pseudogene Mus_musculus 0 1057
ENSMUST00000129154 Hnrnpa1l2-ps-001 processed_pseudogene Mus_musculus 0 1048
ENSMUST00000181363 Gm8652-001 processed_pseudogene Mus_musculus 0 1013
ENSMUST00000022493 Gm5803-001 processed_pseudogene Mus_musculus 0 1005
ENSMUST00000119097 Gm13418-001 processed_pseudogene Mus_musculus 0 811
ENSMUST00000050143 Gm7729-001 unprocessed_pseudogene Mus_musculus 0 809
ENSMUST00000036004 Hnrnpa1-201 protein_coding Mus_musculus 0 809
ENSMUST00000118970 Gm16216-001 processed_pseudogene Mus_musculus 0 782
ENSMUST00000184038 Gm5269-001 translated_processed_pseudogene Mus_musculus 0 713
ENSMUST00000178732 RP24-383H12.1-001 processed_pseudogene Mus_musculus 0 641
ENSMUST00000189260 RP23-389M9.4-001 processed_pseudogene Mus_musculus 0 431
ENSMUST00000122005 Gm12382-001 processed_pseudogene Mus_musculus 0 420
ENSMUST00000122346 Gm11860-001 processed_pseudogene Mus_musculus 8e-34 148

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