C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000406712 RP3-334F4.1-001 ENSG00000220773 9606 + 6:54624605-54625488 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastKidneyMusclePlacentaTestisENST00000406712
Transcript ID Bladder Brain Breast Kidney Muscle Placenta Testis
ENST00000406712 0.149±0.00 0.020±0.00 0.019±0.00 0.018±0.00 0.106±0.00 0.085±0.00 0.148±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000057740 Rpsa-ps10-201 protein_coding Mus_musculus 0 802
ENSMUST00000035105 Rpsa-201 protein_coding Mus_musculus 0 791
ENSMUST00000120702 Rpsa-ps9-001 processed_pseudogene Mus_musculus 0 778
ENSMUST00000121691 Rpsa-ps4-001 processed_pseudogene Mus_musculus 0 752
ENSMUST00000120423 Gm9083-001 processed_pseudogene Mus_musculus 0 715
ENSMUST00000120191 Gm11824-001 processed_pseudogene Mus_musculus 0 704
ENSMUST00000191040 Rpsa-ps1-001 processed_pseudogene Mus_musculus 0 691
ENSMUST00000118817 Gm5764-001 processed_pseudogene Mus_musculus 0 562
ENSMUST00000186198 RP23-2I19.1-001 processed_pseudogene Mus_musculus 0 538
ENSMUST00000059546 Rpsa-ps2-201 processed_pseudogene Mus_musculus 0 490
ENSMUST00000162286 Gm16228-001 processed_pseudogene Mus_musculus 0 196

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